RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 IMMP1LQ96LU5 166 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 PTCHD1Q96NR3 888 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 F2RL3Q96RI0 385 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 SLC6A16Q9GZN6 736 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 VPS11Q9H270 941 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 CDC42EP4Q9H3Q1 356 aaKnown RBP8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 NECTIN3Q9NQS3 549 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 SNX15Q9NRS6 342 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 ZNF358Q9NW07 568 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 PCDHGA10Q9Y5H3 936 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 SLC22A7Q9Y694 548 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 FLNCQ14315 2725 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 PTPN13Q12923 2485 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 UBR5O95071 2799 aaPredicted RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 DYTNA2CJ06 578 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 HMX2A2RU54 273 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 ANKDD1BA6NHY2 528 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 PSMD12O00232 456 aaPredicted RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 SAP18O00422 153 aaKnown RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 RTCAO00442 366 aaKnown RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 ERI3O43414 337 aaKnown RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 KLHL41O60662 606 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 WDPCPO95876 746 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 C2P06681 752 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 LTA4HP09960 611 aaKnown RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 EPORP19235 508 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 CERS1P27544 350 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 PPP2R1BP30154 601 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 AHRP35869 848 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 HNRNPFP52597 415 aaKnown RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 PMP22Q01453 160 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 IRF8Q02556 426 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 CHIT1Q13231 466 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 PDK4Q16654 411 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 CRB2Q5IJ48 1285 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 FHL5Q5TD97 284 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 SULT1C3Q6IMI6 304 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 IGFL2Q6UWQ7 119 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 CLNKQ7Z7G1 428 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 ISCA2Q86U28 154 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 HPS6Q86YV9 775 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 BEST3Q8N1M1 668 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 KRT78Q8N1N4 520 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 CA13Q8N1Q1 262 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 PLD6Q8N2A8 252 aaKnown RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 MMGT1Q8N4V1 131 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 FAM26EQ8N5C1 309 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 TEX9Q8N6V9 391 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 LRRN4CLQ8ND94 238 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 TMEM52Q8NDY8 209 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 GRHL3Q8TE85 626 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 PPP4R1Q8TF05 950 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 ANKRD7Q92527 254 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 KIAA1191Q96A73 305 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 FAR2Q96K12 515 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 SCYL1Q96KG9 808 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 UBXN10Q96LJ8 280 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 TUBB6Q9BUF5 446 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 SORBS1Q9BX66 1292 aaKnown RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 HES7Q9BYE0 225 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 SLC29A3Q9BZD2 475 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 NMRAL1Q9HBL8 299 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 KLHL1Q9NR64 748 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 CPSF2Q9P2I0 782 aaKnown RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 C19orf25Q9UFG5 118 aaPredicted RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 MTRF1LQ9UGC7 380 aaKnown RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 PTBP2Q9UKA9 531 aaKnown RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 ZNF490Q9ULM2 529 aaPredicted RBP8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 ACOT9Q9Y305 439 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 ICE1Q9Y2F5 2266 aa8.91□□□□□ -0.98
NSMCE1-203ENST00000562039 ZGRF1Q86YA3 2104 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 LRRK2Q5S007 2527 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 ASH1LQ9NR48 2969 aaKnown RBP8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 PRRC2CQ9Y520 2896 aaKnown RBP8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 A0A096LPK6 155 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 ANKUB1A6NFN9 424 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 TBX6O95947 436 aaPredicted RBP8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 TGFB1P01137 390 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 SERPINA6P08185 405 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 RHOXF2BP0C7M4 288 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 SMIM10L1P0DMW3 83 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 CRABP2P29373 138 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 TYK2P29597 1187 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 ECHS1P30084 290 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 PHBP35232 272 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 SOX11P35716 441 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 MSH2P43246 934 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 PIK3CGP48736 1102 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 ID2Q02363 134 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 TLR1Q15399 786 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 PFKFB4Q16877 469 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 ABHD17BQ5VST6 288 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 CYS1Q717R9 158 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 CRLF3Q8IUI8 442 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 GSPT2Q8IYD1 628 aaKnown RBP8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 KLHDC8AQ8IYD2 350 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 CENPLQ8N0S6 344 aaPredicted RBP8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 TCAIMQ8N3R3 496 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 PDPRQ8NCN5 879 aa8.9□□□□□ -0.98
NSMCE1-203ENST00000562039 PLPP5Q8NEB5 264 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms