RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 WDR54Q9H977 334 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 ADGRE2Q9UHX3 823 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 PADI2Q9Y2J8 665 aa19.22■□□□□ 0.67
TSPAN3-207ENST00000559494 MED13Q9UHV7 2174 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 A0A0G2JN53 185 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 CDC14CA4D256 554 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 ZNF860A6NHJ4 632 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 AGPSO00116 658 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 RDH16O75452 317 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 OR4F21O95013 312 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 TGFB1P01137 390 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 UMODP07911 640 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 ZGLP1P0C6A0 271 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 PIK3CBP42338 1070 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 NEK2P51955 445 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 OCA2Q04671 838 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 DDX39BQ13838 428 aaKnown RBP19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 UGT8Q16880 541 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 GGTA1PQ4G0N0 100 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 SHISA6Q6ZSJ9 500 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 UBE3DQ7Z6J8 389 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 OR5T3Q8NGG3 340 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 ADAMTS17Q8TE56 1095 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 GAL3ST3Q96A11 431 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 MIEF2Q96C03 454 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 MTERF1Q99551 399 aaKnown RBP19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 REXO4Q9GZR2 422 aaKnown RBP19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 SOX17Q9H6I2 414 aaPredicted RBP19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 TMBIM4Q9HC24 238 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 MKKSQ9NPJ1 570 aaPredicted RBP19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 HCN3Q9P1Z3 774 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 MID2Q9UJV3 735 aa19.21■□□□□ 0.67
TSPAN3-207ENST00000559494 ERI3O43414 337 aaKnown RBP19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 SH3BGRLO75368 114 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 MYZAPP0CAP1 466 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 SERPINB1P30740 379 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 ALDH3A1P30838 453 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 FOLR3P41439 243 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 ETV4P43268 484 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 PLA2G16P53816 162 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 BTN3A2P78410 334 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 SSPNQ14714 243 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 DEPDC1Q5TB30 811 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 LIPMQ5VYY2 423 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 PRSS58Q8IYP2 241 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 OR2L5Q8NG80 312 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 OR51Q1Q8NH59 317 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 MTFMTQ96DP5 389 aaKnown RBP19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 CMTM7Q96FZ5 175 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 QRFPRQ96P65 431 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 ZNF382Q96SR6 550 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 TGIF2Q9GZN2 237 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 OR51B5Q9H339 312 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 SSU72Q9NP77 194 aaKnown RBP19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 DMRT3Q9NQL9 472 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 ARGLU1Q9NWB6 273 aaPredicted RBP19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 ACTL7BQ9Y614 415 aa19.2■□□□□ 0.66
TSPAN3-207ENST00000559494 MAGEB17A8MXT2 336 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 UBFD1O14562 309 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 CHST10O43529 356 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 TRIM13O60858 407 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 BMP10O95393 424 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 MLYCDO95822 493 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 CCR10P46092 362 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 RPS13P62277 151 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 OLR1P78380 273 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 KLC1Q07866 573 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 MPP2Q14168 576 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 ABHD17CQ6PCB6 329 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 ZC3H7AQ8IWR0 971 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 REPS1Q96D71 796 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 MECRQ9BV79 373 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 GATA5Q9BWX5 397 aaPredicted RBP19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 PRDM7Q9NQW5 492 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 TRPS1Q9UHF7 1281 aa19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 NXT1Q9UKK6 140 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-207ENST00000559494 ZFYVE26Q68DK2 2539 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 UQCRHLA0A096LP55 91 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 FOXE1O00358 373 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 JRKO75564 520 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 UQCRHP07919 91 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 OTX2P32243 289 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 LCP2Q13094 533 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 RUNX2Q13950 521 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 DEFB109BQ30KR1 87 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 KHDRBS2Q5VWX1 349 aaKnown RBP19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 FRG2Q64ET8 278 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 TTC19Q6DKK2 380 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 NIPAL1Q6NVV3 410 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 FRMD7Q6ZUT3 714 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 GPRIN3Q6ZVF9 776 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 CHSY3Q70JA7 882 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 FAR2Q96K12 515 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 MAGEB10Q96LZ2 347 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 FRG2BQ96QU4 278 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 CLK4Q9HAZ1 481 aaKnown RBP19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 PRM3Q9NNZ6 103 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 PSD3Q9NYI0 1048 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 LHX6Q9UPM6 363 aa19.18■□□□□ 0.66
TSPAN3-207ENST00000559494 SAP18O00422 153 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms