RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 NSA2O95478 260 aaKnown RBP16.55■□□□□ 0.24
TPM1-214ENST00000558544 ENO1P06733 434 aaKnown RBP16.55■□□□□ 0.24
TPM1-214ENST00000558544 NEFHP12036 1026 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 LIFP15018 202 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 FOXA1P55317 472 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 DNASE1L3Q13609 305 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 ADPRMQ3LIE5 342 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 DEFB134Q4QY38 66 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 MLIPQ5VWP3 458 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 CES4AQ5XG92 561 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 CUZD1Q86UP6 607 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 SPACA3Q8IXA5 215 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 AFAP1L2Q8N4X5 818 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 OR6Y1Q8NGX8 325 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 SELENOMQ8WWX9 145 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 CMTM7Q96FZ5 175 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 OR51B5Q9H339 312 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 GPN2Q9H9Y4 310 aaPredicted RBP16.55■□□□□ 0.24
TPM1-214ENST00000558544 FARSBQ9NSD9 589 aaKnown RBP16.55■□□□□ 0.24
TPM1-214ENST00000558544 GPN3Q9UHW5 284 aaPredicted RBP16.55■□□□□ 0.24
TPM1-214ENST00000558544 SNX6Q9UNH7 406 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 TIMM22Q9Y584 194 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 SAP18O00422 153 aaKnown RBP16.54■□□□□ 0.24
TPM1-214ENST00000558544 MANBAO00462 879 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 TERTO14746 1132 aaKnown RBP16.54■□□□□ 0.24
TPM1-214ENST00000558544 GALR3O60755 368 aaPredicted RBP16.54■□□□□ 0.24
TPM1-214ENST00000558544 RDH16O75452 317 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 PDYNP01213 254 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 SERPINE1P05121 402 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 SMIM10L1P0DMW3 83 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 F8A1P23610 371 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 ARRB2P32121 409 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 HTR6P50406 440 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 PLA2G16P53816 162 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 MAT1AQ00266 395 aaKnown RBP16.54■□□□□ 0.24
TPM1-214ENST00000558544 NCF4Q15080 339 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 SYT16Q17RD7 645 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 ARL13AQ5H913 290 aaPredicted RBP16.54■□□□□ 0.24
TPM1-214ENST00000558544 TRIM40Q6P9F5 258 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 ATG14Q6ZNE5 492 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 LRRC69Q6ZNQ3 347 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 ENDOVQ8N8Q3 282 aaKnown RBP16.54■□□□□ 0.24
TPM1-214ENST00000558544 OR2L5Q8NG80 312 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 KIAA1143Q96AT1 154 aaPredicted RBP16.54■□□□□ 0.24
TPM1-214ENST00000558544 SMIM10Q96HG1 83 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 HBEGFQ99075 208 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 C17orf62Q9BQA9 187 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 HCN3Q9P1Z3 774 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 FIS1Q9Y3D6 152 aa16.54■□□□□ 0.24
TPM1-214ENST00000558544 MRPS18BQ9Y676 258 aaKnown RBP16.54■□□□□ 0.24
TPM1-214ENST00000558544 C21orf140B9A014 251 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 H0YIG0 161 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 H3BQF6 201 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 FOXE1O00358 373 aaPredicted RBP16.53■□□□□ 0.24
TPM1-214ENST00000558544 LYPLA1O75608 230 aaPredicted RBP16.53■□□□□ 0.24
TPM1-214ENST00000558544 ETHE1O95571 254 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 ONECUT2O95948 504 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 KRT6AP02538 564 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 KRT6BP04259 564 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 PIM1P11309 404 aaPredicted RBP16.53■□□□□ 0.24
TPM1-214ENST00000558544 SERPINB3P29508 390 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 SERPINB5P36952 375 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 KRT6CP48668 564 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 RPS18P62269 152 aaKnown RBP16.53■□□□□ 0.24
TPM1-214ENST00000558544 PPP2R2AP63151 447 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 OLR1P78380 273 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 DSG2Q14126 1118 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 C10orf62Q5T681 223 aaPredicted RBP16.53■□□□□ 0.24
TPM1-214ENST00000558544 KHDRBS2Q5VWX1 349 aaKnown RBP16.53■□□□□ 0.24
TPM1-214ENST00000558544 CLEC6AQ6EIG7 209 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 ABHD17CQ6PCB6 329 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 CHSY3Q70JA7 882 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 AMER3Q8N944 861 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 FAR2Q96K12 515 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 YIPF2Q9BWQ6 316 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 EML4Q9HC35 981 aaKnown RBP16.53■□□□□ 0.24
TPM1-214ENST00000558544 CTSFQ9UBX1 484 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 IL17BQ9UHF5 180 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 ZMIZ1Q9ULJ6 1067 aa16.53■□□□□ 0.24
TPM1-214ENST00000558544 RTCAO00442 366 aaKnown RBP16.52■□□□□ 0.24
TPM1-214ENST00000558544 ITM2AO43736 263 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 CNOT3O75175 753 aaKnown RBP16.52■□□□□ 0.24
TPM1-214ENST00000558544 RAB40ALP0C0E4 278 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 PTX3P26022 381 aaPredicted RBP16.52■□□□□ 0.24
TPM1-214ENST00000558544 ITPKBP27987 946 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 RAP1GDS1P52306 607 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 FOXL2P58012 376 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 RPS15P62841 145 aaKnown RBP16.52■□□□□ 0.24
TPM1-214ENST00000558544 SKP1P63208 163 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 BTN3A2P78410 334 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 TGM3Q08188 693 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 GALNT1Q10472 559 aaPredicted RBP16.52■□□□□ 0.24
TPM1-214ENST00000558544 TMEM35AQ53FP2 167 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 DEPDC1Q5TB30 811 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 FAM69BQ5VUD6 431 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 MRPL14Q6P1L8 145 aaKnown RBP16.52■□□□□ 0.24
TPM1-214ENST00000558544 OVCH1Q7RTY7 1134 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 UBE3DQ7Z6J8 389 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 SHISA5Q8N114 240 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 OR5T3Q8NGG3 340 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms