RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 CCNB2O95067 398 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 TSPAN12O95859 305 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PEX11BO96011 259 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 C1QBP02746 253 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ATXN8OSP0DMR3 200 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CKBP12277 381 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 IL1RNP18510 177 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CST5P28325 142 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PCSK1P29120 753 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 OR1E1P30953 314 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ACVRL1P37023 503 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 MAP2K3P46734 347 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CCT3P49368 545 aaKnown RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PGFP49763 221 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 WDR5P61964 334 aaKnown RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ZXDBP98169 803 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ASAH1Q13510 395 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ARHGEF7Q14155 803 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 DSC3Q14574 896 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ZNF284Q2VY69 593 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 C1orf53Q5VUE5 145 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 MZT2BQ6NZ67 158 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 XKRXQ6PP77 449 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 GPR65Q8IYL9 337 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 TCTE3Q8IZS6 198 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 RDH10Q8IZV5 341 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 LGI4Q8N135 537 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 FBXL6Q8N531 539 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 NLGN4YQ8NFZ3 816 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 C9orf43Q8TAL5 461 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 SELENOMQ8WWX9 145 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 NELL1Q92832 810 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 DACT3Q96B18 629 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 NIPSNAP1Q9BPW8 284 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 SPON2Q9BUD6 331 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 TRIM62Q9BVG3 475 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 SPATA9Q9BWV2 254 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 LATS2Q9NRM7 1088 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ZNF226Q9NYT6 803 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 SLC6A14Q9UN76 642 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 VPS9D1Q9Y2B5 631 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ACTL7AQ9Y615 435 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 TSC2P49815 1807 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CACNA1HO95180 2353 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 RLFQ13129 1914 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 TEX51A0A1B0GUA7 166 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 WASHC1A8K0Z3 465 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 FADS2P1A8MWK0 482 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 A8MX80 341 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ATP6V1G2-DDX39BF2Z307 99 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 MANBAO00462 879 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 LZTS3O60299 673 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ARHGEF15O94989 841 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ALPPP05187 535 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PRKAR1AP10644 381 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 SLC2A2P11168 524 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PRKACAP17612 351 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 TACR1P25103 407 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 KIR3DL1P43629 444 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 BRCC3P46736 316 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 TTPAP49638 278 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 GZMMP51124 257 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ACVR1Q04771 509 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 POU4F3Q15319 338 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 SSX1Q16384 188 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 IQCCQ4KMZ1 466 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 FLYWCH1Q4VC44 716 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CTSL3PQ5NE16 218 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 DDI2Q5TDH0 399 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 LIPKQ5VXJ0 399 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 SAXO2Q658L1 398 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 LRRC66Q68CR7 880 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ZNF57Q68EA5 555 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 KIAA1841Q6NSI8 718 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ZNF551Q7Z340 670 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 MIB1Q86YT6 1006 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 TMC8Q8IU68 726 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 SLC37A3Q8NCC5 494 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 GALNT11Q8NCW6 608 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ATP6V1C2Q8NEY4 427 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 OR9Q2Q8NGE9 314 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PIH1D2Q8WWB5 315 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 DNAJB3Q8WWF6 145 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 MAL2Q969L2 176 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 APOLD1Q96LR9 279 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 GABARAPL3Q9BY60 117 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 MRPL9Q9BYD2 267 aaKnown RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 POLR2J2Q9GZM3 115 aaKnown RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ELOVL6Q9H5J4 265 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 UBE2ZQ9H832 354 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 C12orf10Q9HB07 376 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 C11orf16Q9NQ32 467 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PLCXD1Q9NUJ7 323 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 NLE1Q9NVX2 485 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ABI2Q9NYB9 513 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 COMMD3Q9UBI1 195 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 KLHL21Q9UJP4 597 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ZNF222Q9UK12 451 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 RWDD3Q9Y3V2 267 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms