RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CREB3L4Q8TEY5 395 aa21.2■□□□□ 0.98
ACTN1-220ENST00000556433 SCMH1Q96GD3 660 aa21.2■□□□□ 0.98
ACTN1-220ENST00000556433 SH3BGRL2Q9UJC5 107 aa21.2■□□□□ 0.98
ACTN1-220ENST00000556433 ARHGAP10A1A4S6 786 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 E7ESA3 106 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 FAM227AF5H4B4 570 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 HNRNPRO43390 633 aaKnown RBP21.19■□□□□ 0.98
ACTN1-220ENST00000556433 SERPINA6P08185 405 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 RNH1P13489 461 aaKnown RBP21.19■□□□□ 0.98
ACTN1-220ENST00000556433 MAOAP21397 527 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 GDF5P43026 501 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 TSNQ15631 228 aaKnown RBP21.19■□□□□ 0.98
ACTN1-220ENST00000556433 C18orf21Q32NC0 220 aaPredicted RBP21.19■□□□□ 0.98
ACTN1-220ENST00000556433 QSOX2Q6ZRP7 698 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 ADAMTSL2Q86TH1 951 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 LGI4Q8N135 537 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 TMEM178AQ8NBL3 297 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 KRT12Q99456 494 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 RHOJQ9H4E5 214 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 GPAMQ9HCL2 828 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 NSMCE4AQ9NXX6 385 aa21.19■□□□□ 0.98
ACTN1-220ENST00000556433 WDR47O94967 919 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 SP1P08047 785 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 C1GALT1C1LP0DN25 315 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 GNAZP19086 355 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 RPL21P46778 160 aaKnown RBP21.18■□□□□ 0.98
ACTN1-220ENST00000556433 SLC12A2P55011 1212 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 CASP6P55212 293 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 ALDH6A1Q02252 535 aaKnown RBP21.18■□□□□ 0.98
ACTN1-220ENST00000556433 SLC25A25Q6KCM7 469 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 MTFR2Q6P444 385 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 CAPN12Q6ZSI9 719 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 GALNTL5Q7Z4T8 443 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 MRGPRGQ86SM5 289 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 ZBED8Q8IZ13 594 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 CA13Q8N1Q1 262 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 ITLN2Q8WWU7 325 aaPredicted RBP21.18■□□□□ 0.98
ACTN1-220ENST00000556433 MARVELD3Q96A59 401 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 CCDC120Q96HB5 630 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 NECTIN3Q9NQS3 549 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 PRDM9Q9NQV7 894 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 LRFN1Q9P244 771 aa21.18■□□□□ 0.98
ACTN1-220ENST00000556433 CELSR2Q9HCU4 2923 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 TCRBV16S1A1N1A0A5B0 115 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 A8MUA0 341 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 SLC19A2O60779 497 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 PIAS1O75925 651 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 NEURL1O76050 574 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 MLYCDO95822 493 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 BTN3A2P78410 334 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 MRPS25P82663 173 aaKnown RBP21.17■□□□□ 0.98
ACTN1-220ENST00000556433 ART3Q13508 389 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 KRTCAP3Q53RY4 240 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 ZNF468Q5VIY5 522 aaPredicted RBP21.17■□□□□ 0.98
ACTN1-220ENST00000556433 SLCO4C1Q6ZQN7 724 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 TICAM1Q8IUC6 712 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 ARMC2Q8NEN0 867 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 THAP3Q8WTV1 239 aaPredicted RBP21.17■□□□□ 0.98
ACTN1-220ENST00000556433 RHBDF1Q96CC6 855 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 UNKQ9C0B0 810 aaKnown RBP21.17■□□□□ 0.98
ACTN1-220ENST00000556433 AICDAQ9GZX7 198 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 TSPAN10Q9H1Z9 355 aaPredicted RBP21.17■□□□□ 0.98
ACTN1-220ENST00000556433 POPDC3Q9HBV1 291 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 SMYD2Q9NRG4 433 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 RNF14Q9UBS8 474 aa21.17■□□□□ 0.98
ACTN1-220ENST00000556433 MTO1Q9Y2Z2 717 aaKnown RBP21.17■□□□□ 0.98
ACTN1-220ENST00000556433 MYO9AB2RTY4 2548 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 IGKV3D-11A0A0A0MRZ8 115 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 ASPDHA6ND91 283 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 NCF1BA6NI72 391 aaPredicted RBP21.16■□□□□ 0.98
ACTN1-220ENST00000556433 SAGE2PA6NJ88 616 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 NCF1CA8MVU1 366 aaPredicted RBP21.16■□□□□ 0.98
ACTN1-220ENST00000556433 C4orf51C9J302 202 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 NPIPA5E9PKD4 350 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 CDK2AP1O14519 115 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 NCF1P14598 390 aaPredicted RBP21.16■□□□□ 0.98
ACTN1-220ENST00000556433 TPP2P29144 1249 aaPredicted RBP21.16■□□□□ 0.98
ACTN1-220ENST00000556433 SLC6A12P48065 614 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 STXBP1P61764 594 aaKnown RBP21.16■□□□□ 0.98
ACTN1-220ENST00000556433 CBLBQ13191 982 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 MAPKAPK3Q16644 382 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.16■□□□□ 0.98
ACTN1-220ENST00000556433 KLHDC8AQ8IYD2 350 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 SPATA6LQ8N4H0 392 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 FAM98AQ8NCA5 519 aaKnown RBP21.16■□□□□ 0.98
ACTN1-220ENST00000556433 BBOF1Q8ND07 529 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 NFAM1Q8NET5 270 aaPredicted RBP21.16■□□□□ 0.98
ACTN1-220ENST00000556433 PYROXD1Q8WU10 500 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 CCT6BQ92526 530 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 FAR2Q96K12 515 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 GPR137Q96N19 417 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 MCMBPQ9BTE3 642 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 NPIPA1Q9UND3 350 aa21.16■□□□□ 0.98
ACTN1-220ENST00000556433 MLF1P58340 268 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 POU4F1Q01851 419 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 RUNX2Q13950 521 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 SLBPQ14493 270 aaKnown RBP eCLIP21.15■□□□□ 0.98
ACTN1-220ENST00000556433 C3AR1Q16581 482 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 CRYBG3Q68DQ2 2970 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 TMIGD1Q6UXZ0 262 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms