RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 LGSNQ5TDP6 509 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 FAAH2Q6GMR7 532 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 METTL2BQ6P1Q9 378 aaKnown RBP10.88□□□□□ -0.67
SLIRP-206ENST00000556375 ADGRD1Q6QNK2 874 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 NDUFAF7Q7L592 441 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 VN1R5Q7Z5H4 357 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 CNTRLQ7Z7A1 2325 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 SHISA5Q8N114 240 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 METTL21AQ8WXB1 218 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.88□□□□□ -0.67
SLIRP-206ENST00000556375 CCT6BQ92526 530 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 TM9SF4Q92544 642 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 UBE2E3Q969T4 207 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 TBC1D20Q96BZ9 403 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 PEX11GQ96HA9 241 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 RBCK1Q9BYM8 510 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 ZNF700Q9H0M5 742 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 RHBGQ9H310 441 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 KLHL31Q9H511 634 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 LANCL2Q9NS86 450 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 ZNF358Q9NW07 568 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 CPSF2Q9P2I0 782 aaKnown RBP10.88□□□□□ -0.67
SLIRP-206ENST00000556375 PSMC3IPQ9P2W1 217 aaPredicted RBP10.88□□□□□ -0.67
SLIRP-206ENST00000556375 XPR1Q9UBH6 696 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 C19orf25Q9UFG5 118 aaPredicted RBP10.88□□□□□ -0.67
SLIRP-206ENST00000556375 TMCO1Q9UM00 188 aa10.88□□□□□ -0.67
SLIRP-206ENST00000556375 TNPO3Q9Y5L0 923 aaKnown RBP10.88□□□□□ -0.67
SLIRP-206ENST00000556375 A0A088AWK7 358 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 LRIT2A6NDA9 550 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 ERI3O43414 337 aaKnown RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 CHST10O43529 356 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 ZNF500O60304 480 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 TBX6O95947 436 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 RNH1P13489 461 aaKnown RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 ZNF10P21506 573 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 SERPINB1P30740 379 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 HNRNPH1P31943 449 aaKnown RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 PIK3CGP48736 1102 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 AP2B1P63010 937 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 OLR1P78380 273 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 RHAGQ02094 409 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 Q0VFX4 171 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 SLC29A2Q14542 456 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 HIST2H2ACQ16777 129 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 NADK2Q4G0N4 442 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 HIST2H2AA3Q6FI13 130 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 ADNP2Q6IQ32 1131 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 GRHL2Q6ISB3 625 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 IGFL3Q6UXB1 125 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 TIFABQ6ZNK6 161 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 RIPOR1Q6ZS17 1223 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 LANCL3Q6ZV70 420 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 PARP9Q8IXQ6 854 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 KBTBD2Q8IY47 623 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 LAS2Q8IYD9 372 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 TEX9Q8N6V9 391 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 RBMXL3Q8N7X1 1067 aaKnown RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 PTGR2Q8N8N7 351 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 OR2L5Q8NG80 312 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 MS4A6EQ96DS6 147 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 THOC3Q96J01 351 aaKnown RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 FAR2Q96K12 515 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 SCYL1Q96KG9 808 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 MRPL57Q9BQC6 102 aaKnown RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 TUBB6Q9BUF5 446 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 TRIM4Q9C037 500 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 REXO4Q9GZR2 422 aaKnown RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 MRPL46Q9H2W6 279 aaKnown RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 ZNF490Q9ULM2 529 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-206ENST00000556375 ANGPTL3Q9Y5C1 460 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 FLNCQ14315 2725 aa10.87□□□□□ -0.67
SLIRP-206ENST00000556375 IQANK1A0A1B0GTG1 560 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 MAGEB17A8MXT2 336 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 STX16-NPEPL1H3BU86 382 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 PSMD12O00232 456 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-206ENST00000556375 E2F3O00716 465 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 STX16O14662 325 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 UGDHO60701 494 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 CDC123O75794 336 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-206ENST00000556375 SORBS2O94875 1100 aaKnown RBP10.86□□□□□ -0.67
SLIRP-206ENST00000556375 SIX3O95343 332 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-206ENST00000556375 SERPINA7P05543 415 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 PRR35P0CG20 571 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 BTN3A2P78410 334 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 TGM3Q08188 693 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 GTF2H2Q13888 395 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 ABRAXAS2Q15018 415 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 COLEC12Q5KU26 742 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 AGAP7PQ5VUJ5 663 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 SLC6A19Q695T7 634 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 JMJD6Q6NYC1 403 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-206ENST00000556375 GTF2H2CQ6P1K8 395 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 MED27Q6P2C8 311 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 TRIM40Q6P9F5 258 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 IGFL2Q6UWQ7 119 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 QSOX2Q6ZRP7 698 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 CPEB2Q7Z5Q1 589 aaKnown RBP10.86□□□□□ -0.67
SLIRP-206ENST00000556375 LCA5Q86VQ0 697 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 PLPP5Q8NEB5 264 aa10.86□□□□□ -0.67
SLIRP-206ENST00000556375 ZNF473Q8WTR7 871 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms