RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 NMUR2Q9GZQ4 415 aa8.78□□□□□ -1
ACTN1-218ENST00000556343 DDX31Q9H8H2 851 aaKnown RBP8.78□□□□□ -1
ACTN1-218ENST00000556343 WDR41Q9HAD4 459 aa8.78□□□□□ -1
ACTN1-218ENST00000556343 FAM60AQ9NP50 221 aa8.78□□□□□ -1
ACTN1-218ENST00000556343 RXFP3Q9NSD7 469 aa8.78□□□□□ -1
ACTN1-218ENST00000556343 LYARQ9NX58 379 aaKnown RBP8.78□□□□□ -1
ACTN1-218ENST00000556343 MS4A12Q9NXJ0 267 aa8.78□□□□□ -1
ACTN1-218ENST00000556343 TMEM9Q9P0T7 183 aa8.78□□□□□ -1
ACTN1-218ENST00000556343 RARRES3Q9UL19 164 aa8.78□□□□□ -1
ACTN1-218ENST00000556343 POLR3HQ9Y535 204 aaPredicted RBP8.78□□□□□ -1
ACTN1-218ENST00000556343 ARID1BQ8NFD5 2236 aaPredicted RBP8.78□□□□□ -1
ACTN1-218ENST00000556343 TMEM131Q92545 1883 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 RALGAPA1Q6GYQ0 2036 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 LOC105369274A0A096LPK9 316 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 LOC102723532A0A0G2JNH3 316 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 HYKKA2RU49 373 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 GDF9O60383 454 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 PRAMEF10O60809 474 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 HNRNPCL1O60812 293 aaKnown RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 ETHE1O95571 254 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 ZNF888P0CJ79 500 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 PIM1P11309 404 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 G6PDP11413 515 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 BCKDHAP12694 445 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 ALOX12P18054 663 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 PRPS1L1P21108 318 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 HIST1H1TP22492 207 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 CCKBRP32239 447 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 BSGP35613 385 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 HPCAL1P37235 193 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 RASSF2P50749 326 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 CLDN8P56748 225 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 KCNK10P57789 538 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 BTN3A2P78410 334 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 SRSF11Q05519 484 aaKnown RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 ZFP36L1Q07352 338 aaKnown RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 FOXM1Q08050 763 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 KLF10Q13118 480 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 EIF3IQ13347 325 aaKnown RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 CYLC2Q14093 348 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 FAM53BQ14153 422 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 IL11RAQ14626 422 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 DPY19L1Q2PZI1 675 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 AGKQ53H12 422 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 FAM91A1Q658Y4 838 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 TMEM198Q66K66 360 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 TMEM214Q6NUQ4 689 aaKnown RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 ZNF574Q6ZN55 896 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 IKBIPQ70UQ0 350 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 CLNKQ7Z7G1 428 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 SLITRK4Q8IW52 837 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 OR4N4Q8N0Y3 316 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 TMEM132CQ8N3T6 1108 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 RNF175Q8N4F7 328 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 VPS37AQ8NEZ2 397 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 RP9Q8TA86 221 aaKnown RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 ADAMTS18Q8TE60 1221 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 UTP15Q8TED0 518 aaKnown RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 TSPEARQ8WU66 669 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 NSL1Q96IY1 281 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 FCRL1Q96LA6 429 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 ZNF285Q96NJ3 590 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 FCRL4Q96PJ5 515 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 DEPDC7Q96QD5 511 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 SERINC2Q96SA4 455 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 MYLK2Q9H1R3 596 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 KLHL31Q9H511 634 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 SDR39U1Q9NRG7 319 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 ENAMQ9NRM1 1142 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 FGF21Q9NSA1 209 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 ATAD3AQ9NVI7 634 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 PHF11Q9UIL8 331 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 PSME2Q9UL46 239 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 SRPK3Q9UPE1 567 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 CLCA2Q9UQC9 943 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 GPR45Q9Y5Y3 372 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 COPG1Q9Y678 874 aaKnown RBP8.77□□□□□ -1.01
ACTN1-218ENST00000556343 ADAMTS9Q9P2N4 1935 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 WDFY4Q6ZS81 3184 aa8.77□□□□□ -1.01
ACTN1-218ENST00000556343 FAM234BA2RU67 622 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 BLACEA4D250 179 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 FITM1A5D6W6 292 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 EFCAB7A8K855 629 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 PLPP1O14494 284 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 POLR1CO15160 346 aaPredicted RBP8.76□□□□□ -1.01
ACTN1-218ENST00000556343 CFLARO15519 480 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 MT-CO3P00414 261 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 IL6P05231 212 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 SNRPB2P08579 225 aaKnown RBP8.76□□□□□ -1.01
ACTN1-218ENST00000556343 ALDOCP09972 364 aaKnown RBP8.76□□□□□ -1.01
ACTN1-218ENST00000556343 FAM58BPP0C7Q3 252 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 SMIM10L1P0DMW3 83 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 ESRRAP11474 423 aaPredicted RBP8.76□□□□□ -1.01
ACTN1-218ENST00000556343 CEACAM1P13688 526 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 DRD2P14416 443 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 FOLR1P15328 257 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 JAK1P23458 1154 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 ATP5A1P25705 553 aaKnown RBP8.76□□□□□ -1.01
ACTN1-218ENST00000556343 PIK3R1P27986 724 aa8.76□□□□□ -1.01
ACTN1-218ENST00000556343 HNRNPH1P31943 449 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms