RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 OLAHQ9NV23 265 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 CIDEBQ9UHD4 219 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 MMP17Q9ULZ9 603 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 SH2B3Q9UQQ2 575 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 INVSQ9Y283 1065 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 WDR37Q9Y2I8 494 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 AP1M2Q9Y6Q5 423 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 CEP290O15078 2479 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 GABRR3A8MPY1 467 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 EVPLLA8MZ36 301 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 CHURC1-FNTBB4DL54 471 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 RNASET2O00584 256 aaKnown RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 RFXANKO14593 260 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 FPGTO14772 594 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 SLC31A1O15431 190 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 MBTPS2O43462 519 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 PRICKLE3O43900 615 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 KLHL18O94889 574 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 PRSS23O95084 383 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 COX7A2P14406 83 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 PPIBP23284 216 aaKnown RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 HTR1BP28222 390 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 NDUFS1P28331 727 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 PKLRP30613 574 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 NUDT1P36639 197 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 EIF1AXP47813 144 aaKnown RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 TPMTP51580 245 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 CCR5P51681 352 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 AQP4P55087 323 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 REEP5Q00765 189 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 FOLH1Q04609 750 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 PRKCQQ04759 706 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 PRDX1Q06830 199 aaKnown RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF763Q0D2J5 394 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 MED21Q13503 144 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 DDX39BQ13838 428 aaKnown RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 NFATC4Q14934 902 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 MLF2Q15773 248 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 LRRC36Q1X8D7 754 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 DEPDC1Q5TB30 811 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 THEMIS2Q5TEJ8 643 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 OR4F3Q6IEY1 312 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 ADNP2Q6IQ32 1131 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 HMBOX1Q6NT76 420 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 ERICH5Q6P6B1 374 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 CHST15Q7LFX5 561 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 COMMD6Q7Z4G1 85 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 VN1R5Q7Z5H4 357 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 CACUL1Q86Y37 369 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 ZDHHC13Q8IUH4 622 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 MICU2Q8IYU8 434 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 EID3Q8N140 333 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 SYNPOQ8N3V7 929 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 RNF175Q8N4F7 328 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 MARVELD2Q8N4S9 558 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 MFSD2AQ8NA29 543 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 TTLQ8NG68 377 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 OR10A6Q8NH74 314 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 ZFPM2Q8WW38 1151 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 FAM3CQ92520 227 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 KLK6Q92876 244 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 EME1Q96AY2 570 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF764Q96H86 408 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 QRFPRQ96P65 431 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 IL17FQ96PD4 163 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 OR2M4Q96R27 311 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 INPP5KQ9BT40 448 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 DUSP26Q9BV47 211 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 SARGQ9BW04 601 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 PHF7Q9BWX1 381 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 OSBPL11Q9BXB4 747 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 UGT2B28Q9BY64 529 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 TRIM8Q9BZR9 551 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 REXO4Q9GZR2 422 aaKnown RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 SLC6A17Q9H1V8 727 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 IKZF5Q9H5V7 419 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 REEP4Q9H6H4 257 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 MAGIXQ9H6Y5 334 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 KIR3DX1Q9H7L2 352 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 YY1AP1Q9H869 796 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 COQ10BQ9H8M1 238 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 ATAD3AQ9NVI7 634 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 USP36Q9P275 1121 aaKnown RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF639Q9UID6 485 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 ADAM29Q9UKF5 820 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 SUFUQ9UMX1 484 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 CORO2BQ9UQ03 480 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 EXO1Q9UQ84 846 aaKnown RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 TDRKHQ9Y2W6 561 aaKnown RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 COLEC10Q9Y6Z7 277 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 COL4A2P08572 1712 aa7.94□□□□□ -1.14
ATXN3-235ENST00000556082 LAMA2P24043 3122 aaKnown RBP7.94□□□□□ -1.14
ATXN3-235ENST00000556082 TRPM6Q9BX84 2022 aa7.93□□□□□ -1.14
ATXN3-235ENST00000556082 PRSS38A1L453 326 aa7.93□□□□□ -1.14
ATXN3-235ENST00000556082 A6NHS1 94 aa7.93□□□□□ -1.14
ATXN3-235ENST00000556082 ANKDD1BA6NHY2 528 aa7.93□□□□□ -1.14
ATXN3-235ENST00000556082 H3BQ06 376 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-235ENST00000556082 CLIC1O00299 241 aa7.93□□□□□ -1.14
ATXN3-235ENST00000556082 CXCR6O00574 342 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms