RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 BANPQ8N9N5 519 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 TC2NQ8N9U0 490 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 PGM2Q96G03 612 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 TIGD1Q96MW7 591 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 ALKBH3Q96Q83 286 aaPredicted RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 BARD1Q99728 777 aaKnown RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 TREX2Q9BQ50 279 aaPredicted RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 CCDC106Q9BWC9 280 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 PNNQ9H307 717 aaKnown RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 RNF121Q9H920 327 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 MRPL15Q9P015 296 aaKnown RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 SLC12A6Q9UHW9 1150 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 VPS28Q9UK41 221 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 PPIEQ9UNP9 301 aaKnown RBP1.91□□□□□ -2.1
SRP54-207ENST00000555535 PLEKHA6Q9Y2H5 1048 aa1.91□□□□□ -2.1
SRP54-207ENST00000555535 TEX48A0A1B0GUV7 120 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 KIF5CO60282 957 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 PGM3O95394 542 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 PCGF2P35227 344 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 MEOX2P50222 304 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 LIMK1P53667 647 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 CLDN17P56750 224 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 STK4Q13043 487 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 PCK2Q16822 640 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 RFWD3Q6PCD5 774 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 ZNF600Q6ZNG1 722 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 DET1Q7L5Y6 550 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 CENPVQ7Z7K6 275 aaPredicted RBP1.9□□□□□ -2.11
SRP54-207ENST00000555535 EXOC8Q8IYI6 725 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 TEX26Q8N6G2 289 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 NFAM1Q8NET5 270 aaPredicted RBP1.9□□□□□ -2.11
SRP54-207ENST00000555535 PYCR2Q96C36 320 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 ZNF799Q96GE5 643 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 KLHL4Q9C0H6 718 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 KCNK13Q9HB14 408 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 C3orf14Q9HBI5 128 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 PIH1D3Q9NQM4 214 aaKnown RBP1.9□□□□□ -2.11
SRP54-207ENST00000555535 VNN3Q9NY84 501 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 RSPH14Q9UHP6 348 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 ITGA11Q9UKX5 1188 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 COLEC10Q9Y6Z7 277 aa1.9□□□□□ -2.11
SRP54-207ENST00000555535 EDDM13A0A1B0GTR0 161 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 LOC390937A0A1W2PQ73 354 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 IGLON5A6NGN9 336 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 E2F3O00716 465 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 MLNRO43193 412 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 CELF2O95319 508 aaKnown RBP1.89□□□□□ -2.11
SRP54-207ENST00000555535 MT-ND2P03891 347 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 ACSM1Q08AH1 577 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 RBBP7Q16576 425 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 HSP90AB4PQ58FF6 505 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 VWA2Q5GFL6 755 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 TTC27Q6P3X3 843 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 ZCCHC12Q6PEW1 402 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 ZNRF1Q8ND25 227 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 SEPT1Q8WYJ6 367 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 JAKMIP2Q96AA8 810 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 LRRC3BQ96PB8 259 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 MCCC1Q96RQ3 725 aaPredicted RBP1.89□□□□□ -2.11
SRP54-207ENST00000555535 MAPKAP1Q9BPZ7 522 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 EBF4Q9BQW3 602 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 SCRT1Q9BWW7 348 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 KRTAP4-1Q9BYQ7 146 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 PKD2L2Q9NZM6 624 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 ANAPC2Q9UJX6 822 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 NIP7Q9Y221 180 aaKnown RBP eCLIP1.89□□□□□ -2.11
SRP54-207ENST00000555535 CPQQ9Y646 472 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 ITIH6Q6UXX5 1313 aa1.89□□□□□ -2.11
SRP54-207ENST00000555535 hCG_1809904A0A1W2PP81 198 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 A0A1W2PPE2 198 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 A0A1W2PR64 198 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 ZSCAN5CA6NGD5 496 aaPredicted RBP1.88□□□□□ -2.11
SRP54-207ENST00000555535 ADAM20O43506 726 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 LATO43561 262 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 BEST1O76090 585 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 OR52Z1P0C646 297 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 STAG3L1P0CL83 205 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 ZNF17P17021 662 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 SPRP35270 261 aaPredicted RBP1.88□□□□□ -2.11
SRP54-207ENST00000555535 LIG4P49917 911 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 ADARP55265 1226 aaKnown RBP1.88□□□□□ -2.11
SRP54-207ENST00000555535 LETM2Q2VYF4 491 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 RILPL1Q5EBL4 403 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 ARMCX5Q6P1M9 558 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 Q71RC1 249 aaPredicted RBP1.88□□□□□ -2.11
SRP54-207ENST00000555535 TRMT11Q7Z4G4 463 aaKnown RBP1.88□□□□□ -2.11
SRP54-207ENST00000555535 TLK2Q86UE8 772 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 ZNF525Q8N782 197 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 CCDC63Q8NA47 563 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 SECISBP2LQ93073 1101 aaKnown RBP1.88□□□□□ -2.11
SRP54-207ENST00000555535 FAM104AQ969W3 186 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 GDAP1L1Q96MZ0 367 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 RCHY1Q96PM5 261 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 HSD17B14Q9BPX1 270 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 SDF4Q9BRK5 362 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 LIME1Q9H400 295 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 PLEKHA3Q9HB20 300 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 BLOC1S4Q9NUP1 217 aa1.88□□□□□ -2.11
SRP54-207ENST00000555535 TCRBV21S2A2A0A5A6 115 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 ANHXE9PGG2 379 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms