RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 TMEM151AQ8N4L1 468 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 TEX9Q8N6V9 391 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 CCT6BQ92526 530 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 THOC3Q96J01 351 aaKnown RBP12.89□□□□□ -0.35
SNX6-203ENST00000555416 IMMP1LQ96LU5 166 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 QRFPRQ96P65 431 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 F2RL3Q96RI0 385 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 WDR77Q9BQA1 342 aaPredicted RBP12.89□□□□□ -0.35
SNX6-203ENST00000555416 CAPS2Q9BXY5 557 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 ZNF700Q9H0M5 742 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 ANKZF1Q9H8Y5 726 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 XPR1Q9UBH6 696 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 OPTCQ9UBM4 332 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 IKBKGQ9Y6K9 419 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 NSG1A0A0A6YYJ2 146 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 SYCE1LA8MT33 242 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 ERI3O43414 337 aaKnown RBP12.88□□□□□ -0.35
SNX6-203ENST00000555416 SH3BGRLO75368 114 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 SEC24DO94855 1032 aaPredicted RBP12.88□□□□□ -0.35
SNX6-203ENST00000555416 SORBS2O94875 1100 aaKnown RBP12.88□□□□□ -0.35
SNX6-203ENST00000555416 SHBGP04278 402 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 SNRPAP09012 282 aaKnown RBP12.88□□□□□ -0.35
SNX6-203ENST00000555416 PRR35P0CG20 571 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 C8orf89P0DMQ9 161 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 GFAPP14136 432 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 CXCR2P25025 360 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 ALDH18A1P54886 795 aaKnown RBP12.88□□□□□ -0.35
SNX6-203ENST00000555416 BTG2P78543 158 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 PCDH1Q08174 1060 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 TBCCQ15814 346 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 PLEKHN1Q494U1 663 aaPredicted RBP12.88□□□□□ -0.35
SNX6-203ENST00000555416 JMJD6Q6NYC1 403 aaPredicted RBP12.88□□□□□ -0.35
SNX6-203ENST00000555416 RPS27LQ71UM5 84 aaKnown RBP12.88□□□□□ -0.35
SNX6-203ENST00000555416 ANKRD37Q7Z713 158 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 CA13Q8N1Q1 262 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 PTGR2Q8N8N7 351 aaPredicted RBP12.88□□□□□ -0.35
SNX6-203ENST00000555416 MZB1Q8WU39 189 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 GAL3ST3Q96A11 431 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 TBC1D20Q96BZ9 403 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 SCYL1Q96KG9 808 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 NSUN5Q96P11 429 aaKnown RBP12.88□□□□□ -0.35
SNX6-203ENST00000555416 EFCAB11Q9BUY7 163 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 LHPPQ9H008 270 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 RHBGQ9H310 441 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 PLAAQ9Y263 795 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 PCDHGB7Q9Y5F8 929 aa12.88□□□□□ -0.35
SNX6-203ENST00000555416 ANKDD1BA6NHY2 528 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 E2F3O00716 465 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 B4GALT2O60909 372 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 CLEC3AO75596 197 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 FHP07954 510 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 ITGAMP11215 1152 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 CNTFP26441 200 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 EEF1DP29692 281 aaKnown RBP12.87□□□□□ -0.35
SNX6-203ENST00000555416 HNRNPFP52597 415 aaKnown RBP12.87□□□□□ -0.35
SNX6-203ENST00000555416 PLA2G16P53816 162 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 STXBP1P61764 594 aaKnown RBP12.87□□□□□ -0.35
SNX6-203ENST00000555416 ABRAXAS2Q15018 415 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 PCBP2Q15366 365 aaKnown RBP eCLIP12.87□□□□□ -0.353e-7■■■□□ 15.7
SNX6-203ENST00000555416 KLC3Q6P597 504 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 ABHD17CQ6PCB6 329 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 IGFL3Q6UXB1 125 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 TIFABQ6ZNK6 161 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 TAOK1Q7L7X3 1001 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 GOLGA7Q7Z5G4 137 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 CPEB2Q7Z5Q1 589 aaKnown RBP12.87□□□□□ -0.35
SNX6-203ENST00000555416 TMEM52Q8NDY8 209 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 TTLQ8NG68 377 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 OR7G3Q8NG95 312 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 BRIX1Q8TDN6 353 aaKnown RBP12.87□□□□□ -0.35
SNX6-203ENST00000555416 ZNF473Q8WTR7 871 aaKnown RBP12.87□□□□□ -0.35
SNX6-203ENST00000555416 PHF21BQ96EK2 531 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 OR1F2PQ96R84 312 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 PITHD1Q9GZP4 211 aaPredicted RBP12.87□□□□□ -0.35
SNX6-203ENST00000555416 C5AR2Q9P296 337 aa12.87□□□□□ -0.35
SNX6-203ENST00000555416 UBR5O95071 2799 aaPredicted RBP12.87□□□□□ -0.35
SNX6-203ENST00000555416 PRRC2CQ9Y520 2896 aaKnown RBP12.87□□□□□ -0.35
SNX6-203ENST00000555416 A0A1B0GTL3 188 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 CCDC189A1A4V9 331 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 TGFBR3LH3BV60 316 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 GOLGA8RI6L899 631 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 RTCAO00442 366 aaKnown RBP12.86□□□□□ -0.35
SNX6-203ENST00000555416 OR7A17O14581 309 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 DPM1O60762 260 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 WISP1O95388 367 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 TGFB1P01137 390 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 SERPINA7P05543 415 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 PCNAP12004 261 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 COL6A2P12110 1019 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 EPB42P16452 691 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 MAOAP21397 527 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 CERS1P27544 350 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 SOX11P35716 441 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 FOXK1P85037 733 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 GTF2H2Q13888 395 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 NSDHLQ15738 373 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 SFT2D3Q587I9 215 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 AGAP7PQ5VUJ5 663 aa12.86□□□□□ -0.35
SNX6-203ENST00000555416 B3GNTL1Q67FW5 361 aaPredicted RBP12.86□□□□□ -0.35
SNX6-203ENST00000555416 GTF2H2CQ6P1K8 395 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms