RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 CLDN1O95832 211 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 PRR35P0CG20 571 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 IDO1P14902 403 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 EZRP15311 586 aaKnown RBP13.82□□□□□ -0.2
SHMT2-208ENST00000553868 CD22P20273 847 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 PSMB5P28074 263 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 PIK3CBP42338 1070 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 MAZP56270 477 aaKnown RBP13.82□□□□□ -0.2
SHMT2-208ENST00000553868 ERVK-8P63133 956 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 REEP5Q00765 189 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 KRT72Q14CN4 511 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 RPS6KA2Q15349 733 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 ADCK2Q7Z695 626 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 FAM129CQ86XR2 697 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 FAM9CQ8IZT9 166 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 ARL10Q8N8L6 244 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 GPR156Q8NFN8 814 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 OR7G3Q8NG95 312 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 OR4K1Q8NGD4 311 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 OR10G6Q8NH81 332 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 WDR20Q8TBZ3 569 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 CATSPER2Q96P56 530 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 SLC38A3Q99624 504 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 TWSG1Q9GZX9 223 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 EPB41L1Q9H4G0 881 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 LRTM1Q9HBL6 345 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 C1orf109Q9NX04 203 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 SH2B3Q9UQQ2 575 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 LOXL2Q9Y4K0 774 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 PTGDR2Q9Y5Y4 395 aa13.82□□□□□ -0.2
SHMT2-208ENST00000553868 TRBC2A0A5B9 178 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 ANKDD1BA6NHY2 528 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 C9orf172C9J069 976 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 BTN3A3O00478 584 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 LSM1O15116 133 aaKnown RBP13.81□□□□□ -0.2
SHMT2-208ENST00000553868 UBOX5O94941 541 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 AMD1P17707 334 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 POLR2CP19387 275 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-208ENST00000553868 PRPH2P23942 346 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 MAPK1P28482 360 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 MAPK10P53779 464 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 EPHA4P54764 986 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 EMX2Q04743 252 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 EIF3IQ13347 325 aaKnown RBP13.81□□□□□ -0.2
SHMT2-208ENST00000553868 RBBP5Q15291 538 aaKnown RBP13.81□□□□□ -0.2
SHMT2-208ENST00000553868 MAPRE2Q15555 327 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 SLC5A12Q1EHB4 618 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 AP5B1Q2VPB7 878 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 GALNTL6Q49A17 601 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 C6orf136Q5SQH8 315 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 Q6ZSR9 355 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 FNDC5Q8NAU1 212 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 OR6C4Q8NGE1 309 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 MTFMTQ96DP5 389 aaKnown RBP13.81□□□□□ -0.2
SHMT2-208ENST00000553868 CMTM7Q96FZ5 175 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 ABHD17AQ96GS6 310 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 SERPINI1Q99574 410 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 ACPTQ9BZG2 426 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 FARSBQ9NSD9 589 aaKnown RBP13.81□□□□□ -0.2
SHMT2-208ENST00000553868 TXLNGQ9NUQ3 528 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 CUEDC1Q9NWM3 386 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-208ENST00000553868 HRASLS2Q9NWW9 162 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 SPHK1Q9NYA1 384 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 NOP53Q9NZM5 478 aaKnown RBP13.81□□□□□ -0.2
SHMT2-208ENST00000553868 VPS29Q9UBQ0 182 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 PPT2Q9UMR5 302 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 EIF3LQ9Y262 564 aaKnown RBP13.81□□□□□ -0.2
SHMT2-208ENST00000553868 TMED5Q9Y3A6 229 aa13.81□□□□□ -0.2
SHMT2-208ENST00000553868 OR5K3A6NET4 321 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 H7BY64 318 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 ACPPP15309 386 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 UGT2B7P16662 529 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 PRDX6P30041 224 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 PEBP1P30086 187 aaKnown RBP13.8□□□□□ -0.2
SHMT2-208ENST00000553868 RASSF2P50749 326 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 MNAT1P51948 309 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 NEK2P51955 445 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 CSNK1G2P78368 415 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 CCL7P80098 99 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 DDX39BQ13838 428 aaKnown RBP13.8□□□□□ -0.2
SHMT2-208ENST00000553868 CACHD1Q5VU97 1274 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 C1QL3Q5VWW1 255 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 TMEM198Q66K66 360 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 MIER2Q8N344 545 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 KYQ8NBH2 561 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 OR2T11Q8NH01 316 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 HUS1BQ8NHY5 278 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 CMTM5Q96DZ9 223 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 PRAP1Q96NZ9 151 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 OR2A14Q96R47 310 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 HBEGFQ99075 208 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 NRTNQ99748 197 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 CENPKQ9BS16 269 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 DPH7Q9BTV6 452 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 CCDC106Q9BWC9 280 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 STRADBQ9C0K7 418 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 RHBGQ9H310 441 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 ZNF385DQ9H6B1 395 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 DMRT3Q9NQL9 472 aa13.8□□□□□ -0.2
SHMT2-208ENST00000553868 TMEM45AQ9NWC5 275 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms