RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 RGS1Q08116 209 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 CRYMQ14894 314 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 DUPD1Q68J44 220 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 ZNF662Q6ZS27 426 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 CD163Q86VB7 1156 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 MARVELD2Q8N4S9 558 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 TRIM58Q8NG06 486 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 NT5CQ8TCD5 201 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 UTP15Q8TED0 518 aaKnown RBP14.41□□□□□ -0.1
RAB5C-205ENST00000550013 NEIL2Q969S2 332 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 TMEM125Q96AQ2 219 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 HIST1H2AHQ96KK5 128 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 TSNARE1Q96NA8 513 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 HIST1H2AJQ99878 128 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 H2AFJQ9BTM1 129 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 RHBGQ9H310 441 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 MCCC2Q9HCC0 563 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 NECTIN3Q9NQS3 549 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 SLC17A6Q9P2U8 582 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 HRH3Q9Y5N1 445 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 DNAJC13O75165 2243 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 IGKV3D-11A0A0A0MRZ8 115 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 A0A1B0GTH9 108 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 TCRBV16S1A1N1A0A5B0 115 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 C4orf51C9J302 202 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 CDK2AP1O14519 115 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 CDC40O60508 579 aaKnown RBP eCLIP14.4□□□□□ -0.1
RAB5C-205ENST00000550013 BANF1O75531 89 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 TPOP07202 933 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 CCDC175P0C221 793 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 CAPN3P20807 821 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 PTGS2P35354 604 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 SCTRP47872 440 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 SKP1P63208 163 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 HYAL2Q12891 473 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 CEP128Q6ZU80 1094 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 ABHD13Q7L211 337 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 STRA8Q7Z7C7 330 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 SULF2Q8IWU5 870 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 TBC1D19Q8N5T2 526 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 ANKRD53Q8N9V6 530 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 FAM57AQ8TBR7 257 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 FBXL8Q96CD0 374 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 TREX2Q9BQ50 279 aaPredicted RBP14.4□□□□□ -0.1
RAB5C-205ENST00000550013 DEFB126Q9BYW3 111 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 KLHL31Q9H511 634 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 PRDM9Q9NQV7 894 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 ZFP69BQ9UJL9 534 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 IKZF3Q9UKT9 509 aa14.4□□□□□ -0.1
RAB5C-205ENST00000550013 KLF13Q9Y2Y9 288 aaPredicted RBP14.4□□□□□ -0.1
RAB5C-205ENST00000550013 TRBV11-1A0A0K0K1C0 115 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 PABPN1LA6NDY0 278 aaKnown RBP14.39□□□□□ -0.11
RAB5C-205ENST00000550013 GOLGA6L6A8MZA4 724 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 FCHO1O14526 889 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 PEX1O43933 1283 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 HS6ST1O60243 411 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 KRT38O76015 456 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 GUCA1CO95843 209 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 AHSGP02765 367 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 RNH1P13489 461 aaKnown RBP14.39□□□□□ -0.11
RAB5C-205ENST00000550013 PGAM1P18669 254 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 NR0B1P51843 470 aaKnown RBP14.39□□□□□ -0.11
RAB5C-205ENST00000550013 AP1S2P56377 157 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 IL2P60568 153 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 REEP5Q00765 189 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 CSHL1Q14406 222 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 CMPK2Q5EBM0 449 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 CCDC137Q6PK04 289 aaKnown RBP14.39□□□□□ -0.11
RAB5C-205ENST00000550013 EID3Q8N140 333 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 ARMC10Q8N2F6 343 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 POGLUT1Q8NBL1 392 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 APCDD1LQ8NCL9 501 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 SLC5A11Q8WWX8 675 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 SLC6A16Q9GZN6 736 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 AICDAQ9GZX7 198 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 COQ3Q9NZJ6 369 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 ZFATQ9P243 1243 aa14.39□□□□□ -0.11
RAB5C-205ENST00000550013 PHF3Q92576 2039 aaKnown RBP14.39□□□□□ -0.11
RAB5C-205ENST00000550013 PSMD12O00232 456 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-205ENST00000550013 MYO1DO94832 1006 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 SMIM10L1P0DMW3 83 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 TFEBP19484 476 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 AHRP35869 848 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 GPR85P60893 370 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 PDAP1Q13442 181 aaKnown RBP14.38□□□□□ -0.11
RAB5C-205ENST00000550013 CYP1B1Q16678 543 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 TOR1AIP1Q5JTV8 583 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 RNASEH2BQ5TBB1 312 aaKnown RBP14.38□□□□□ -0.11
RAB5C-205ENST00000550013 NIPAL1Q6NVV3 410 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 SPNS3Q6ZMD2 512 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 MDGA2Q7Z553 956 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 PPIL6Q8IXY8 311 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 CYP4Z2PQ8N1L4 340 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 CA13Q8N1Q1 262 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 RASGEF1CQ8N431 466 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 RPRMLQ8N4K4 120 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 SMIM10Q96HG1 83 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 NPDC1Q9NQX5 325 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-205ENST00000550013 ZNF223Q9UK11 482 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-205ENST00000550013 EML6Q6ZMW3 1958 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms