RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 NNMTP40261 264 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 NSG1P42857 185 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 BDKRB1P46663 353 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 CDH12P55289 794 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 RPP38P78345 283 aaKnown RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 MED22Q15528 200 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 CCDC85BQ15834 202 aaPredicted RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 STEAP3Q658P3 488 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 OR2T5Q6IEZ7 315 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 CYP2U1Q7Z449 544 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 CCDC71Q8IV32 467 aaPredicted RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 OR2T29Q8NH02 315 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 DNASE1L2Q92874 299 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 DMRTB1Q96MA1 342 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 PALMDQ9NP74 551 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 ACOT13Q9NPJ3 140 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 TMPRSS11EQ9UL52 423 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 BOLA1Q9Y3E2 137 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 COL4A3Q01955 1670 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 WASHC1A8K0Z3 465 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 RTCAO00442 366 aaKnown RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 MFN2O95140 757 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 GABARAPO95166 117 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 SCELO95171 688 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 CBSLP0DN79 551 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 CCR7P32248 378 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 CBSP35520 551 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 VIPR2P41587 438 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 RECQLP46063 649 aaPredicted RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 COPZ1P61923 177 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 SLC35A2P78381 396 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 B4GALNT1Q00973 533 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 TCEAL5Q5H9L2 206 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 ATAD3BQ5T9A4 648 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 TMC5Q6UXY8 1006 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 WASH2PQ6VEQ5 465 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 ZNF852Q6ZMS4 543 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 NANOGNBQ7Z5D8 188 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 GPR149Q86SP6 731 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 HIPK1Q86Z02 1210 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 FAM20CQ8IXL6 584 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 SVOPLQ8N434 492 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 P2RY13Q9BPV8 354 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 OR51E2Q9H255 320 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 RAD18Q9NS91 495 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 RLIMQ9NVW2 624 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 IL36AQ9UHA7 158 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 PPT2Q9UMR5 302 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 SLC22A1O15245 554 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 LRRTM2O43300 516 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 LEFTY1O75610 366 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 NFATC1O95644 943 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 ANXA5P08758 320 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 PBX2P40425 430 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 ZNF805Q5CZA5 627 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 METTL2BQ6P1Q9 378 aaKnown RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 DPPA4Q7L190 304 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 TMEM132CQ8N3T6 1108 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 CELF2-AS1Q8N7Q2 184 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 OR9Q2Q8NGE9 314 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 VANGL1Q8TAA9 524 aaPredicted RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 DYNC2LI1Q8TCX1 351 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 FGF13Q92913 245 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 HSH2DQ96JZ2 352 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 MACROD1Q9BQ69 325 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 COPS4Q9BT78 406 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 NDEL1Q9GZM8 345 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 OR51B5Q9H339 312 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 DDX28Q9NUL7 540 aaKnown RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 ERVK13-1Q9NX77 482 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 GPR83Q9NYM4 423 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 USE1Q9NZ43 259 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 RAB23Q9ULC3 237 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 TMA7Q9Y2S6 64 aaKnown RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 TNPO3Q9Y5L0 923 aaKnown RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 SLC35F4A4IF30 521 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 CLDN9O95484 217 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 IGFBP1P08833 259 aaPredicted RBP10.65□□□□□ -0.7
LINC00661-204ENST00000549354 CKMT1AP12532 417 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 XPAP23025 273 aaPredicted RBP10.65□□□□□ -0.7
LINC00661-204ENST00000549354 DGKAP23743 735 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 GRK5P34947 590 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 MRPL19P49406 292 aaKnown RBP10.65□□□□□ -0.7
LINC00661-204ENST00000549354 CNTN1Q12860 1018 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 PDGFRLQ15198 375 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 LEXMQ3ZCV2 418 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 UBE2UQ5VVX9 321 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 DESI1Q6ICB0 168 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 NEK5Q6P3R8 708 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 TMPRSS11BQ86T26 416 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 CHCHD4Q8N4Q1 142 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 PBX4Q9BYU1 374 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 SLIRPQ9GZT3 109 aaKnown RBP10.65□□□□□ -0.7
LINC00661-204ENST00000549354 TRIT1Q9H3H1 467 aaKnown RBP10.65□□□□□ -0.7
LINC00661-204ENST00000549354 RDH14Q9HBH5 336 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 QPCTLQ9NXS2 382 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 MOSPD1Q9UJG1 213 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 ERVK-11Q9UQG0 969 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 CCL27Q9Y4X3 112 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 HPRP00739 348 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms