RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 RNF130Q86XS8 419 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 SYT12Q8IV01 421 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 FAM217AQ8IXS0 508 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ENTHD1Q8IYW4 607 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 LINC00471Q8N535 108 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 KRTCAP2Q8N6L1 136 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ATAD1Q8NBU5 361 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 NLGN2Q8NFZ4 835 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 PSMA8Q8TAA3 256 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 GPBAR1Q8TDU6 330 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 HASPINQ8TF76 798 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 GEMIN6Q8WXD5 167 aaKnown RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ASB11Q8WXH4 323 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 KIAA1143Q96AT1 154 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 COQ8BQ96D53 544 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 C7orf34Q96L11 122 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 WDFY2Q96P53 400 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 PANX1Q96RD7 426 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 COPS8Q99627 209 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 SEPT5Q99719 369 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 PTPN18Q99952 460 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 TTPALQ9BTX7 342 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 TMEM245Q9H330 911 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ARMC7Q9H6L4 198 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ZFP14Q9HCL3 533 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 IL26Q9NPH9 171 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 TRPV5Q9NQA5 729 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 CCDC177Q9NQR7 707 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 SPATA6Q9NWH7 488 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ARL15Q9NXU5 204 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 VPS29Q9UBQ0 182 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 AFF4Q9UHB7 1163 aaKnown RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ATP6V1HQ9UI12 483 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 GDF2Q9UK05 429 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 VPS4AQ9UN37 437 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 PCDHGB2Q9Y5G2 931 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 PCDHGA6Q9Y5G7 932 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 OR51B4Q9Y5P0 310 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 PMF1-BGLAPU3KQ54 211 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 CHD5Q8TDI0 1954 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ZFC3H1O60293 1989 aaKnown RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CROCCQ5TZA2 2017 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 PDZK1P1A8MUH7 402 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 MYO1GB0I1T2 1018 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 TNFRSF11BO00300 401 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 GAPDHSO14556 408 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 ZNF197O14709 1029 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 FFAR3O14843 346 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 TM4SF5O14894 197 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 SCAMP2O15127 329 aaKnown RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 GPR42O15529 346 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 PCDHGA12O60330 932 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 PARNO95453 639 aaKnown RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 KRT75O95678 551 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 OXSR1O95747 527 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 LGI1O95970 557 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CD160O95971 181 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 GSTT2P0CG29 244 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 GSTT2BP0CG30 244 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 MYCLP1P12525 358 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 COX7A2P14406 83 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 ZNF30P17039 623 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 BPIP17213 487 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 PRKACGP22612 351 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 MAP2K4P45985 399 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 GSTM5P46439 218 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 RGS6P49758 472 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 SMIM11AP58511 58 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 DCDC1P59894 354 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 NCS1P62166 190 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 SNRPGP62308 76 aaKnown RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 RPS24P62847 133 aaKnown RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 IFITM3Q01628 133 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 ACSM2AQ08AH3 577 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 C19orf57Q0VDD7 668 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 SELENBP1Q13228 472 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 LAPTM5Q13571 262 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 STARD3Q14849 445 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 VEPH1Q14D04 833 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CDKN3Q16667 212 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 MICAQ29983 383 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 PGS1Q32NB8 556 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CRB2Q5IJ48 1285 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 TMEM201Q5SNT2 666 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CPTPQ5TA50 214 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 SDHAF4Q5VUM1 108 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 AGAP6Q5VW22 663 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CDCP2Q5VXM1 449 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 ACSM2BQ68CK6 577 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 LRRC66Q68CR7 880 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 MRM1Q6IN84 353 aaKnown RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CCSAPQ6IQ19 270 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 GRHL2Q6ISB3 625 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 FUT10Q6P4F1 479 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 TRIM40Q6P9F5 258 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 LRFN4Q6PJG9 635 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 XKRXQ6PP77 449 aa6.22□□□□□ -1.41
SNHG1-225ENST00000545920 C6orf15Q6UXA7 325 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 UBE2R2Q712K3 238 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-225ENST00000545920 CEP68Q76N32 757 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms