RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 ZNHIT6Q9NWK9 470 aaKnown RBP8.73□□□□□ -1.01
CHD4-212ENST00000545083 VPS9D1Q9Y2B5 631 aa8.73□□□□□ -1.01
CHD4-212ENST00000545083 SLC22A7Q9Y694 548 aa8.73□□□□□ -1.01
CHD4-212ENST00000545083 TCRBV16S1A1N1A0A5B0 115 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 ZNF839A8K0R7 811 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 KDM4EB2RXH2 506 aaPredicted RBP8.72□□□□□ -1.01
CHD4-212ENST00000545083 AQP7O14520 342 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 SMAD7O15105 426 aaKnown RBP8.72□□□□□ -1.01
CHD4-212ENST00000545083 GALR3O60755 368 aaPredicted RBP8.72□□□□□ -1.01
CHD4-212ENST00000545083 WDR1O75083 606 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 OR6B1O95007 311 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 TJP3O95049 919 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 SYF2O95926 243 aaKnown RBP8.72□□□□□ -1.01
CHD4-212ENST00000545083 GAS8O95995 478 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 ENDOUP21128 410 aaKnown RBP8.72□□□□□ -1.01
CHD4-212ENST00000545083 ARNTP27540 789 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 MAGEA5P43359 124 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 SSR4P51571 173 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 CRADDP78560 199 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 DEFB134Q4QY38 66 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 XKR6Q5GH73 641 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 Q5PR19 223 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 RIPPLY2Q5TAB7 128 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 MEI1Q5TIA1 1274 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 SHEQ5VZ18 495 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 FBXW10Q5XX13 1052 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 CAPN13Q6MZZ7 669 aaPredicted RBP8.72□□□□□ -1.01
CHD4-212ENST00000545083 POMZP3Q6PJE2 187 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 QSOX2Q6ZRP7 698 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 PRUNE1Q86TP1 453 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 SLC22A16Q86VW1 577 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 ZNF740Q8NDX6 193 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 LINC01560Q8TB33 94 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 SLC35B2Q8TB61 432 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 SREK1Q8WXA9 508 aaKnown RBP8.72□□□□□ -1.01
CHD4-212ENST00000545083 LPGAT1Q92604 370 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 RNASE6Q93091 150 aaKnown RBP8.72□□□□□ -1.01
CHD4-212ENST00000545083 THAP11Q96EK4 314 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 SARGQ9BW04 601 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 TREX1Q9NSU2 369 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 BEX4Q9NWD9 120 aaPredicted RBP8.72□□□□□ -1.01
CHD4-212ENST00000545083 ALKBH4Q9NXW9 302 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 SPRR3Q9UBC9 169 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 B4GALT7Q9UBV7 327 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 FBXW2Q9UKT8 454 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 ACAD8Q9UKU7 415 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 ERVK-11Q9UQG0 969 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 DRG1Q9Y295 367 aaKnown RBP8.72□□□□□ -1.01
CHD4-212ENST00000545083 CUBNO60494 3623 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 ANK2Q01484 3957 aa8.72□□□□□ -1.01
CHD4-212ENST00000545083 ATP6AP2A0A1C7CYW4 349 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 TCRBV7S2A1N4TA0A589 114 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 CLCA1A8K7I4 914 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 ERI2A8K979 691 aaKnown RBP8.71□□□□□ -1.02
CHD4-212ENST00000545083 A8MVJ9 347 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 GOLGA8KD6RF30 607 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 GOLGA8TH3BQL2 631 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 ACOT7O00154 380 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 MFAP3LO75121 409 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 ATP6AP2O75787 350 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 ZNF189O75820 626 aaPredicted RBP8.71□□□□□ -1.02
CHD4-212ENST00000545083 OR2J2O76002 312 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 F7P08709 466 aaPredicted RBP8.71□□□□□ -1.02
CHD4-212ENST00000545083 EPXP11678 715 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 CHRM3P20309 590 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 BMP5P22003 454 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 JAK1P23458 1154 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 HRH2P25021 359 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 NMBRP28336 390 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 PEX19P40855 299 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 MAGEA1P43355 309 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 ASCL1P50553 236 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 CLCN2P51788 898 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 GPR143P51810 404 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 WNT3P56703 355 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 TBPL1P62380 186 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 FOXO1Q12778 655 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 HERC3Q15034 1050 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 POU4F3Q15319 338 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 RPS6KA1Q15418 735 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 ZNF750Q32MQ0 723 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 FBXL19-AS1Q494R0 122 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 PCID2Q5JVF3 399 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 IL20RBQ6UXL0 311 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 RGS9BPQ6ZS82 235 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 MPP5Q8N3R9 675 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 FAM109AQ8N4B1 249 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 FBXO15Q8NCQ5 510 aaPredicted RBP8.71□□□□□ -1.02
CHD4-212ENST00000545083 PPHLN1Q8NEY8 458 aaKnown RBP8.71□□□□□ -1.02
CHD4-212ENST00000545083 B3GNT7Q8NFL0 401 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 GIMAP7Q8NHV1 300 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 ASB11Q8WXH4 323 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 NCLNQ969V3 563 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 SEMA4BQ9NPR2 832 aaPredicted RBP8.71□□□□□ -1.02
CHD4-212ENST00000545083 HPF1Q9NWY4 346 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 ZFATQ9P243 1243 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 CRYL1Q9Y2S2 319 aa8.71□□□□□ -1.02
CHD4-212ENST00000545083 CTAGE15A4D2H0 777 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 TRIM64A6NGJ6 449 aa8.7□□□□□ -1.02
CHD4-212ENST00000545083 TUBAL3A6NHL2 446 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms