RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 UTP15Q8TED0 518 aaKnown RBP21.16■□□□□ 0.98
CDKN3-207ENST00000543789 TREX2Q9BQ50 279 aaPredicted RBP21.16■□□□□ 0.98
CDKN3-207ENST00000543789 TRIM54Q9BYV2 358 aa21.16■□□□□ 0.98
CDKN3-207ENST00000543789 ZFP69BQ9UJL9 534 aa21.16■□□□□ 0.98
CDKN3-207ENST00000543789 TACC2O95359 2948 aa21.16■□□□□ 0.98
CDKN3-207ENST00000543789 A0A1B0GTH9 108 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 FANCGO15287 622 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 GABRB3P28472 473 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 AHRP35869 848 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 SCTRP47872 440 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 MEOX1P50221 254 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 AP1S2P56377 157 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 IL2P60568 153 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 CSHL1Q14406 222 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 ARMC10Q8N2F6 343 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 NAT8LQ8N9F0 302 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 ARMC2Q8NEN0 867 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 GABPB2Q8TAK5 448 aaPredicted RBP21.15■□□□□ 0.98
CDKN3-207ENST00000543789 PRDM9Q9NQV7 894 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 NEU2Q9Y3R4 380 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 CELSR1Q9NYQ6 3014 aa21.15■□□□□ 0.98
CDKN3-207ENST00000543789 HIVEP1P15822 2718 aa21.14■□□□□ 0.98
CDKN3-207ENST00000543789 TCRBV16S1A1N1A0A5B0 115 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 URADA6NGE7 173 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 A8MUA0 341 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 PSMD12O00232 456 aaPredicted RBP21.14■□□□□ 0.97
CDKN3-207ENST00000543789 TPOP07202 933 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 CCDC175P0C221 793 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 MAOAP21397 527 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 RBM20Q5T481 1227 aaKnown RBP21.14■□□□□ 0.97
CDKN3-207ENST00000543789 TMEM211Q6ICI0 200 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 SLC5A11Q8WWX8 675 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 ATL1Q8WXF7 558 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 NEIL2Q969S2 332 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 FBXL8Q96CD0 374 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 SCN3AQ9NY46 2000 aa21.14■□□□□ 0.97
CDKN3-207ENST00000543789 IGKV3D-11A0A0A0MRZ8 115 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 PEX1O43933 1283 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 HS6ST1O60243 411 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 CDC40O60508 579 aaKnown RBP eCLIP21.13■□□□□ 0.97
CDKN3-207ENST00000543789 AHSGP02765 367 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 RNH1P13489 461 aaKnown RBP21.13■□□□□ 0.97
CDKN3-207ENST00000543789 PGAM1P18669 254 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 RFC3P40938 356 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 HNF4AP41235 474 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 RAB8AP61006 207 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 CRYMQ14894 314 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 CEP128Q6ZU80 1094 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 CD163Q86VB7 1156 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 TMEM156Q8N614 296 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 C16orf52Q8NHV5 167 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 SPNS1Q9H2V7 528 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 RHBGQ9H310 441 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 NECTIN3Q9NQS3 549 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 ZFATQ9P243 1243 aa21.13■□□□□ 0.97
CDKN3-207ENST00000543789 USP27XA6NNY8 438 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 GUCA1CO95843 209 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 SMIM10L1P0DMW3 83 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 TFEBP19484 476 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 CLCN2P51788 898 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 PDAP1Q13442 181 aaKnown RBP21.12■□□□□ 0.97
CDKN3-207ENST00000543789 CCDC137Q6PK04 289 aaKnown RBP21.12■□□□□ 0.97
CDKN3-207ENST00000543789 PPIL6Q8IXY8 311 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 TRPV3Q8NET8 790 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 B3GNT7Q8NFL0 401 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 ASB5Q8WWX0 329 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 SMIM10Q96HG1 83 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 MS4A14Q96JA4 679 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 SLC6A16Q9GZN6 736 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 HRH3Q9Y5N1 445 aa21.12■□□□□ 0.97
CDKN3-207ENST00000543789 TRBV11-1A0A0K0K1C0 115 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 TTC4O95801 387 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 CYP1B1Q16678 543 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 CMPK2Q5EBM0 449 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 KIAA0408Q6ZU52 694 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 CYP4Z2PQ8N1L4 340 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 RASGEF1CQ8N431 466 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 MARVELD2Q8N4S9 558 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 ANKRD53Q8N9V6 530 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 ZFP62Q8NB50 900 aaPredicted RBP21.11■□□□□ 0.97
CDKN3-207ENST00000543789 APCDD1LQ8NCL9 501 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 LILRB4Q8NHJ6 448 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 TSNARE1Q96NA8 513 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 AIF1LQ9BQI0 150 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 KLHL31Q9H511 634 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 FBXW2Q9UKT8 454 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 DYRK1BQ9Y463 629 aa21.11■□□□□ 0.97
CDKN3-207ENST00000543789 CTAGE15A4D2H0 777 aa21.1■□□□□ 0.97
CDKN3-207ENST00000543789 MYO1DO94832 1006 aa21.1■□□□□ 0.97
CDKN3-207ENST00000543789 ENO2P09104 434 aaPredicted RBP21.1■□□□□ 0.97
CDKN3-207ENST00000543789 REEP5Q00765 189 aa21.1■□□□□ 0.97
CDKN3-207ENST00000543789 HYAL2Q12891 473 aa21.1■□□□□ 0.97
CDKN3-207ENST00000543789 RBBP5Q15291 538 aaKnown RBP21.1■□□□□ 0.97
CDKN3-207ENST00000543789 NXPE4Q6UWF7 544 aa21.1■□□□□ 0.97
CDKN3-207ENST00000543789 CTAGE6Q86UF2 777 aa21.1■□□□□ 0.97
CDKN3-207ENST00000543789 CNTN4Q8IWV2 1026 aa21.1■□□□□ 0.97
CDKN3-207ENST00000543789 RND1Q92730 232 aa21.1■□□□□ 0.97
CDKN3-207ENST00000543789 PELI2Q9HAT8 420 aa21.1■□□□□ 0.97
CDKN3-207ENST00000543789 VWA7Q9Y334 891 aa21.1■□□□□ 0.97
CDKN3-207ENST00000543789 MMACHCQ9Y4U1 282 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms