RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 CHST10O43529 356 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 SNRPAP09012 282 aaKnown RBP14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 C8orf89P0DMQ9 161 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 TNFRSF8P28908 595 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 HNF4AP41235 474 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 STXBP1P61764 594 aaKnown RBP14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 IRF8Q02556 426 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 SLC29A2Q14542 456 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 PCBP2Q15366 365 aaKnown RBP eCLIP14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 PFKFB4Q16877 469 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 MINDY4Q4G0A6 757 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 PAGE2BQ5JRK9 111 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 ADNP2Q6IQ32 1131 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 JMJD6Q6NYC1 403 aaPredicted RBP14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 METTL2BQ6P1Q9 378 aaKnown RBP14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 KBTBD2Q8IY47 623 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 PLPP5Q8NEB5 264 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 GAL3ST3Q96A11 431 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 TBC1D20Q96BZ9 403 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 PEX11GQ96HA9 241 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 IMMP1LQ96LU5 166 aa14.57□□□□□ -0.08
ECHDC2-223ENST00000542552 SCN2AQ99250 2005 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 ANKDD1BA6NHY2 528 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 SORBS2O94875 1100 aaKnown RBP14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 SERPINA7P05543 415 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 FHP07954 510 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 RBP1P09455 135 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 PRR35P0CG20 571 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 GFAPP14136 432 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 EPB42P16452 691 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 CD97P48960 835 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 OLR1P78380 273 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 EEF1A2Q05639 463 aaKnown RBP14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 HIST2H2ACQ16777 129 aaPredicted RBP14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 TSNAXIP1Q2TAA8 658 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 LGSNQ5TDP6 509 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 AGAP7PQ5VUJ5 663 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 HIST2H2AA3Q6FI13 130 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 LANCL3Q6ZV70 420 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 CPEB2Q7Z5Q1 589 aaKnown RBP14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 ANKRD37Q7Z713 158 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 GSPT2Q8IYD1 628 aaKnown RBP14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 LAS2Q8IYD9 372 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 TMEM151AQ8N4L1 468 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 TEX9Q8N6V9 391 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 Q8NA96 180 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 METTL21AQ8WXB1 218 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 PSMF1Q92530 271 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 MTBPQ96DY7 904 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 THOC3Q96J01 351 aaKnown RBP14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 AGAP4Q96P64 663 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 QRFPRQ96P65 431 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 WDR77Q9BQA1 342 aaPredicted RBP14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 TRIM4Q9C037 500 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 RIC8BQ9NVN3 520 aa14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 TNPO3Q9Y5L0 923 aaKnown RBP14.56□□□□□ -0.08
ECHDC2-223ENST00000542552 LRRC14BA6NHZ5 514 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 MAGEB17A8MXT2 336 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 PYCARD-AS1I3L0S3 204 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 E2F3O00716 465 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 ZNF500O60304 480 aaPredicted RBP14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 WISP1O95388 367 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 RNH1P13489 461 aaKnown RBP14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 BTN3A2P78410 334 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 FOXK1P85037 733 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 TEX35Q5T0J7 233 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 SLC6A19Q695T7 634 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 GRHL2Q6ISB3 625 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 RIPOR1Q6ZS17 1223 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 CA13Q8N1Q1 262 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 OR2L5Q8NG80 312 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 ZNF473Q8WTR7 871 aaKnown RBP14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.55□□□□□ -0.081e-7■■■■□ 25.8
ECHDC2-223ENST00000542552 UBE2E3Q969T4 207 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 PNPLA2Q96AD5 504 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 TUBB6Q9BUF5 446 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 NPLQ9BXD5 320 aaPredicted RBP14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 RBCK1Q9BYM8 510 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 REXO4Q9GZR2 422 aaKnown RBP14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 CPSF2Q9P2I0 782 aaKnown RBP14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 C19orf25Q9UFG5 118 aaPredicted RBP14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 TMCO1Q9UM00 188 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 TSC22D4Q9Y3Q8 395 aa14.55□□□□□ -0.08
ECHDC2-223ENST00000542552 CNTRLQ7Z7A1 2325 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 ERI3O43414 337 aaKnown RBP14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 SIX3O95343 332 aaPredicted RBP14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 SBK3P0C264 359 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 ICAM2P13598 275 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 JAK1P23458 1154 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 HPDP32754 393 aaPredicted RBP14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 SOX11P35716 441 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 RUNX2Q13950 521 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 ABRAXAS2Q15018 415 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 NSDHLQ15738 373 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 MFSD4BQ5TF39 518 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 IRAK1BP1Q5VVH5 260 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 LIPJQ5W064 366 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 MED27Q6P2C8 311 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 ABHD17CQ6PCB6 329 aa14.54□□□□□ -0.08
ECHDC2-223ENST00000542552 QSOX2Q6ZRP7 698 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms