RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 COX6A1P12074 109 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 EEF1DP29692 281 aaKnown RBP9.18□□□□□ -0.94
YBX3-212ENST00000542002 CD97P48960 835 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 NEK2P51955 445 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 PLA2G16P53816 162 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 SOX8P57073 446 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 BTN3A2P78410 334 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 BTG2P78543 158 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 RHAGQ02094 409 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 GTF2H2Q13888 395 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 MDC1Q14676 2089 aaKnown RBP9.18□□□□□ -0.94
YBX3-212ENST00000542002 PCOLCEQ15113 449 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 RBBP7Q16576 425 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 LACTB2Q53H82 288 aaPredicted RBP9.18□□□□□ -0.94
YBX3-212ENST00000542002 GTF2H2CQ6P1K8 395 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 WDR93Q6P2C0 686 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 TAOK1Q7L7X3 1001 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 PARP9Q8IXQ6 854 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 KRT78Q8N1N4 520 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 CA13Q8N1Q1 262 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 TBC1D19Q8N5T2 526 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 OR7G3Q8NG95 312 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 OR52B6Q8NGF0 335 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 ZNF473Q8WTR7 871 aaKnown RBP9.18□□□□□ -0.94
YBX3-212ENST00000542002 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.18□□□□□ -0.94
YBX3-212ENST00000542002 MARVELD3Q96A59 401 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 FER1L6-AS2Q96M78 137 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 SMAD5Q99717 465 aaKnown RBP9.18□□□□□ -0.94
YBX3-212ENST00000542002 EFCAB11Q9BUY7 163 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 PARD6BQ9BYG5 372 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 PITHD1Q9GZP4 211 aaPredicted RBP9.18□□□□□ -0.94
YBX3-212ENST00000542002 NOL11Q9H8H0 719 aaKnown RBP9.18□□□□□ -0.94
YBX3-212ENST00000542002 IPPKQ9H8X2 491 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 ZNF160Q9HCG1 818 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 ATP13A2Q9NQ11 1180 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 PCTPQ9UKL6 214 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 PCDHGA9Q9Y5G4 932 aaKnown RBP9.18□□□□□ -0.94
YBX3-212ENST00000542002 IGHV1-45A0A0A0MS14 117 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 IQANK1A0A1B0GTG1 560 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 A0A1W2PQ72 361 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 ANKDD1BA6NHY2 528 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 SMIM23A6NLE4 172 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 A8MT66 165 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 SAP18O00422 153 aaKnown RBP9.17□□□□□ -0.94
YBX3-212ENST00000542002 RTCAO00442 366 aaKnown RBP9.17□□□□□ -0.94
YBX3-212ENST00000542002 ERI3O43414 337 aaKnown RBP9.17□□□□□ -0.94
YBX3-212ENST00000542002 TGFB1P01137 390 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 IGHEP01854 428 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 PCNAP12004 261 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 ACPPP15309 386 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 TSPAN8P19075 237 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 PIK3CGP48736 1102 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 HNRNPFP52597 415 aaKnown RBP9.17□□□□□ -0.94
YBX3-212ENST00000542002 RRADP55042 308 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 CDH13P55290 713 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 EEF1A2Q05639 463 aaKnown RBP9.17□□□□□ -0.94
YBX3-212ENST00000542002 LAPTM5Q13571 262 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 TSNAXIP1Q2TAA8 658 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 MINDY4Q4G0A6 757 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 NADK2Q4G0N4 442 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 UNC50Q53HI1 259 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 GRHL2Q6ISB3 625 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 MED27Q6P2C8 311 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 ABHD17CQ6PCB6 329 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 ZNF793Q6ZN11 406 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 ABHD13Q7L211 337 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 NDUFAF7Q7L592 441 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 ANKRD37Q7Z713 158 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 ZNF605Q86T29 641 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 TDRPQ86YL5 185 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 L3MBTL4Q8NA19 623 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 TMEM52Q8NDY8 209 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 PLPP5Q8NEB5 264 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 TTLQ8NG68 377 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 HUS1BQ8NHY5 278 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 CCT6BQ92526 530 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 PSMF1Q92530 271 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 TSLPQ969D9 159 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 TBC1D20Q96BZ9 403 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 IMMP1LQ96LU5 166 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 MTERF1Q99551 399 aaKnown RBP9.17□□□□□ -0.94
YBX3-212ENST00000542002 WDR77Q9BQA1 342 aaPredicted RBP9.17□□□□□ -0.94
YBX3-212ENST00000542002 CCDC77Q9BR77 488 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 SORBS1Q9BX66 1292 aaKnown RBP9.17□□□□□ -0.94
YBX3-212ENST00000542002 REXO4Q9GZR2 422 aaKnown RBP9.17□□□□□ -0.94
YBX3-212ENST00000542002 ZNF700Q9H0M5 742 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 MRPL46Q9H2W6 279 aaKnown RBP9.17□□□□□ -0.94
YBX3-212ENST00000542002 C14orf105Q9NVL8 296 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 KCMF1Q9P0J7 381 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 ZNF225Q9UK10 706 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 CLDN16Q9Y5I7 305 aa9.17□□□□□ -0.94
YBX3-212ENST00000542002 TNPO3Q9Y5L0 923 aaKnown RBP9.17□□□□□ -0.94
YBX3-212ENST00000542002 MED13Q9UHV7 2174 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 G3V2L1 256 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 H0YIV9 168 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 STX16-NPEPL1H3BU86 382 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 TGFBR3LH3BV60 316 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 CYR61O00622 381 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 STX16O14662 325 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 B4GALT2O60909 372 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms