RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 PAGE3Q5JUK9 113 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 FCRL6Q6DN72 434 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 FBXW8Q8N3Y1 598 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 ARL10Q8N8L6 244 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 CEP76Q8TAP6 659 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 BAHD1Q8TBE0 780 aaPredicted RBP13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 RGMAQ96B86 450 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 LRRC58Q96CX6 371 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 CLPTM1LQ96KA5 538 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 QRFPRQ96P65 431 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 F2RL3Q96RI0 385 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 CDRT15Q96T59 188 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 REXO4Q9GZR2 422 aaKnown RBP13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 MYNNQ9NPC7 610 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 SPAG4Q9NPE6 437 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 EVA1BQ9NVM1 165 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 SLC7A8Q9UHI5 535 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 PILRAQ9UKJ1 303 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 WASF3Q9UPY6 502 aa13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 WBP11Q9Y2W2 641 aaKnown RBP13.59□□□□□ -0.23
CYB561A3-216ENST00000540755 ZFYVE26Q68DK2 2539 aa13.58□□□□□ -0.23
CYB561A3-216ENST00000540755 SPEGQ15772 3267 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 ADAMTS9Q9P2N4 1935 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 SCAMP2O15127 329 aaKnown RBP13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 DFNA5O60443 496 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 CIB2O75838 187 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 LRATO95237 230 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 KLK1P06870 262 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 PROS1P07225 676 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 TYRP1P17643 537 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 TPP2P29144 1249 aaPredicted RBP13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 HPCAL1P37235 193 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 RPL3P39023 403 aaKnown RBP13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 LSSP48449 732 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 CYP4F3Q08477 520 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 UGT8Q16880 541 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 PIGGQ5H8A4 983 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 FBXO42Q6P3S6 717 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 SLC2A7Q6PXP3 512 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 IKBIPQ70UQ0 350 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 KANSL1Q7Z3B3 1105 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 CAMKMTQ7Z624 323 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 NET1Q7Z628 596 aaPredicted RBP13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 NUDT13Q86X67 352 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 DNAJB8Q8NHS0 232 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 NT5CQ8TCD5 201 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 C16orf78Q8WTQ4 265 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 NUDT8Q8WV74 236 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 OR52E6Q96RD3 313 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 ABCG4Q9H172 646 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 FSCN3Q9NQT6 498 aa13.58□□□□□ -0.24
CYB561A3-216ENST00000540755 C15orf38-AP3S2A0A0A6YYH1 394 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 RHPN2P1A8MT19 583 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 A8MUI8 341 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 CAPN5O15484 640 aaPredicted RBP13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 NUDT21O43809 227 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 KLHL18O94889 574 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 SERPIND1P05546 499 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 COX7A2P14406 83 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 ENGP17813 658 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 KIR3DL1P43629 444 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 TSFMP43897 325 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 HNRNPFP52597 415 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 STXBP1P61764 594 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 PHC1P78364 1004 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 PWP1Q13610 501 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 MAPKAPK3Q16644 382 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 HKDC1Q2TB90 917 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 CCNYL2Q5T2Q4 361 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 FAM71E1Q6IPT2 247 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 SLC23A3Q6PIS1 610 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 RNF44Q7L0R7 432 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 ZNF438Q7Z4V0 828 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 VN1R4Q7Z5H5 301 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 R3HCC1LQ7Z5L2 792 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 UBE3DQ7Z6J8 389 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 ARPINQ7Z6K5 226 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 DHDDSQ86SQ9 333 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 ASPGQ86U10 573 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 GPR180Q86V85 440 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 TMEM132CQ8N3T6 1108 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 SRFBP1Q8NEF9 429 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 OR8J2Q8NGG1 315 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 GTF2H4Q92759 462 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 GFM2Q969S9 779 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 MS4A6EQ96DS6 147 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 TM4SF19Q96DZ7 209 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 OR2A5Q96R48 311 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 ZFYVE21Q9BQ24 234 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 DUSP23Q9BVJ7 150 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 SLC6A16Q9GZN6 736 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 AICDAQ9GZX7 198 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 RAB33BQ9H082 229 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 SEMA6CQ9H3T2 930 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 EPB41L1Q9H4G0 881 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 DENND2DQ9H6A0 471 aaPredicted RBP13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 RMND5AQ9H871 391 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 DDX31Q9H8H2 851 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 SYNPO2LQ9H987 977 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms