RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 PPP1R3AQ16821 1122 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 STEAP4Q687X5 459 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 SLC25A25Q6KCM7 469 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 XKRXQ6PP77 449 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 NXPE4Q6UWF7 544 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 FRA10AC1Q70Z53 315 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.08□□□□□ -0.96
CHD4-207ENST00000537634 SPPL2CQ8IUH8 684 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 ANKMY2Q8IV38 441 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 KLHL7Q8IXQ5 586 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 NKAPQ8N5F7 415 aaKnown RBP9.08□□□□□ -0.96
CHD4-207ENST00000537634 ELP5Q8TE02 316 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 TMEM125Q96AQ2 219 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 CAPZA3Q96KX2 299 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 PWWP2AQ96N64 755 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 RUNDC3BQ96NL0 473 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 SLC6A16Q9GZN6 736 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 RHBGQ9H310 441 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 PRDM9Q9NQV7 894 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 TRMT1Q9NXH9 659 aaKnown RBP9.08□□□□□ -0.96
CHD4-207ENST00000537634 IKZF3Q9UKT9 509 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 NPIPA1Q9UND3 350 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 SLC22A14Q9Y267 594 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 PSAT1Q9Y617 370 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 TEX264Q9Y6I9 313 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 ABCA12Q86UK0 2595 aa9.08□□□□□ -0.96
CHD4-207ENST00000537634 CELSR2Q9HCU4 2923 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 TCRBV16S1A1N1A0A5B0 115 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 CDC7O00311 574 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 FCHO1O14526 889 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 NME2P1O60361 137 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 DNAJB6O75190 326 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 WISP2O76076 250 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 WDR47O94967 919 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 SERPINA6P08185 405 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 COX6B1P14854 86 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 ABOP16442 354 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 NME2P22392 152 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 TPP2P29144 1249 aaPredicted RBP9.07□□□□□ -0.96
CHD4-207ENST00000537634 PTGER4P35408 488 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 CYB561P49447 251 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 HNMTP50135 292 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 ITGA8P53708 1063 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 MLF1P58340 268 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 STXBP1P61764 594 aaKnown RBP9.07□□□□□ -0.96
CHD4-207ENST00000537634 CDKL1Q00532 357 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 MGAT5Q09328 741 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 FRG1Q14331 258 aaKnown RBP9.07□□□□□ -0.96
CHD4-207ENST00000537634 ZNF460Q14592 562 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 ZNF630Q2M218 657 aaPredicted RBP9.07□□□□□ -0.96
CHD4-207ENST00000537634 TOR1AIP1Q5JTV8 583 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 Q6ZPB1 254 aaPredicted RBP9.07□□□□□ -0.96
CHD4-207ENST00000537634 GDF7Q7Z4P5 450 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 ADAMTSL2Q86TH1 951 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 ZC3HC1Q86WB0 502 aaKnown RBP9.07□□□□□ -0.96
CHD4-207ENST00000537634 GHDCQ8N2G8 530 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 ANKRD53Q8N9V6 530 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 CCT6BQ92526 530 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 ANKRD7Q92527 254 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 VPS39Q96JC1 886 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 FAR2Q96K12 515 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 WDR83Q9BRX9 315 aaKnown RBP9.07□□□□□ -0.96
CHD4-207ENST00000537634 TRIM51Q9BSJ1 452 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 DEFB126Q9BYW3 111 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 KLHL31Q9H511 634 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 CTNNAL1Q9UBT7 734 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 ZNF835Q9Y2P0 537 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 OARD1Q9Y530 152 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 CRYBG3Q68DQ2 2970 aa9.07□□□□□ -0.96
CHD4-207ENST00000537634 NCOA6Q14686 2063 aaPredicted RBP9.06□□□□□ -0.96
CHD4-207ENST00000537634 A0A088AWK7 358 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 IGKV3D-11A0A0A0MRZ8 115 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 CTAGE15A4D2H0 777 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 A8MUA0 341 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 ASNA1O43681 348 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 H2AFYO75367 372 aaKnown RBP9.06□□□□□ -0.96
CHD4-207ENST00000537634 SEC31AO94979 1220 aaKnown RBP9.06□□□□□ -0.96
CHD4-207ENST00000537634 SNRPB2P08579 225 aaKnown RBP9.06□□□□□ -0.96
CHD4-207ENST00000537634 SMIM10L1P0DMW3 83 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 GNAZP19086 355 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 AGAP20933 346 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 ZNF10P21506 573 aaPredicted RBP9.06□□□□□ -0.96
CHD4-207ENST00000537634 ELAVL4P26378 380 aaKnown RBP9.06□□□□□ -0.96
CHD4-207ENST00000537634 HLCSP50747 726 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 SLC12A2P55011 1212 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 TAS2R39P59534 338 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 BTN3A2P78410 334 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 ADORA2A-AS1P86434 159 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 HYAL2Q12891 473 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 PDIA2Q13087 525 aaKnown RBP9.06□□□□□ -0.96
CHD4-207ENST00000537634 TERF2Q15554 542 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 TSNQ15631 228 aaKnown RBP9.06□□□□□ -0.96
CHD4-207ENST00000537634 ZNF468Q5VIY5 522 aaPredicted RBP9.06□□□□□ -0.96
CHD4-207ENST00000537634 CTAGE6Q86UF2 777 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 SIAH3Q8IW03 269 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.06□□□□□ -0.96
CHD4-207ENST00000537634 EID3Q8N140 333 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 CA13Q8N1Q1 262 aa9.06□□□□□ -0.96
CHD4-207ENST00000537634 CPSF7Q8N684 471 aaKnown RBP9.06□□□□□ -0.96
CHD4-207ENST00000537634 FBXO36Q8NEA4 188 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms