RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 ZNF655Q8N720 491 aaPredicted RBP23.5■■□□□ 1.35
LDLRAD3-203ENST00000528989 OR8K5Q8NH50 307 aa23.5■■□□□ 1.35
LDLRAD3-203ENST00000528989 ZNF501Q96CX3 271 aaPredicted RBP23.5■■□□□ 1.35
LDLRAD3-203ENST00000528989 TEX37Q96LM6 180 aa23.5■■□□□ 1.35
LDLRAD3-203ENST00000528989 OR6C1Q96RD1 312 aa23.5■■□□□ 1.35
LDLRAD3-203ENST00000528989 MYLK2Q9H1R3 596 aa23.5■■□□□ 1.35
LDLRAD3-203ENST00000528989 ZNF385DQ9H6B1 395 aa23.5■■□□□ 1.35
LDLRAD3-203ENST00000528989 AIG1Q9NVV5 245 aa23.5■■□□□ 1.35
LDLRAD3-203ENST00000528989 PCDHGA1Q9Y5H4 931 aa23.5■■□□□ 1.35
LDLRAD3-203ENST00000528989 ZSCAN9O15535 394 aaPredicted RBP23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 DNAJB6O75190 326 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 OR2B3O76000 313 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 SEMA3DO95025 777 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 SMIM10L1P0DMW3 83 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 SDC1P18827 310 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 TPP2P29144 1249 aaPredicted RBP23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 BTN3A2P78410 334 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 FOXM1Q08050 763 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 DEFB134Q4QY38 66 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 SMIM10Q96HG1 83 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 CENPKQ9BS16 269 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 C9JVG2 144 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 ANXA4P09525 319 aaPredicted RBP23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 CSTF2P33240 577 aaKnown RBP eCLIP23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 SIM1P81133 766 aaPredicted RBP23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 GALNT18Q6P9A2 607 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 TRIM40Q6P9F5 258 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 OR9I1Q8NGQ6 314 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 NETO1Q8TDF5 533 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 ERP27Q96DN0 273 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 FCRL1Q96LA6 429 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 TSSK3Q96PN8 268 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 KCNC2Q96PR1 638 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 AHSPQ9NZD4 102 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 EIF3LQ9Y262 564 aaKnown RBP23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 TMED5Q9Y3A6 229 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 CEP250Q9BV73 2442 aa23.49■■□□□ 1.35
LDLRAD3-203ENST00000528989 SCN3AQ9NY46 2000 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 COL27A1Q8IZC6 1860 aaPredicted RBP23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 GNG14A0A1W2PPG7 69 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 PCDH7O60245 1069 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 MSL3P1P0C860 447 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 IL1RNP18510 177 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 TIA1P31483 386 aaKnown RBP eCLIP23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 SSR2P43308 183 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 TRA2AQ13595 282 aaKnown RBP eCLIP23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 SMU1Q2TAY7 513 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 MANEAQ5SRI9 462 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 CDCP2Q5VXM1 449 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 PAOXQ6QHF9 649 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 CYP20A1Q6UW02 462 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 PDSS2Q86YH6 399 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 GAL3ST3Q96A11 431 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 C10orf90Q96M02 699 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 ACTL8Q9H568 366 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 APMAPQ9HDC9 416 aa23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 SIDT1Q9NXL6 827 aaKnown RBP23.48■■□□□ 1.35
LDLRAD3-203ENST00000528989 HYKKA2RU49 373 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 TMPRSS11DO60235 418 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 CCDC22O60826 627 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 CCL4P13236 92 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 UFM1P61960 85 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 MAD2L1Q13257 205 aaPredicted RBP23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 TCTE1Q5JU00 501 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 CCNYL2Q5T2Q4 361 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 CLNKQ7Z7G1 428 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 GFM2Q969S9 779 aaKnown RBP23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 METTL2AQ96IZ6 378 aaKnown RBP23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 NLNQ9BYT8 704 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 DDX31Q9H8H2 851 aaKnown RBP23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 DCHS1Q96JQ0 3298 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 EFCAB7A8K855 629 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 DCTN3O75935 186 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 FTH1P19P0C7X4 201 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 IDO1P14902 403 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 HIST1H1TP22492 207 aaPredicted RBP23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 ATP5A1P25705 553 aaKnown RBP23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 CERS1P27544 350 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 RPS6KA2Q15349 733 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 ACOT4Q8N9L9 421 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 CDC26Q8NHZ8 85 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 TMEM74Q96NL1 305 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 CCDC106Q9BWC9 280 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 SDR39U1Q9NRG7 319 aaPredicted RBP23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 SIRT5Q9NXA8 310 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 SERTAD3Q9UJW9 196 aa23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 CNOT1A5YKK6 2376 aaKnown RBP23.47■■□□□ 1.35
LDLRAD3-203ENST00000528989 ARHGAP10A1A4S6 786 aa23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 FITM1A5D6W6 292 aa23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 URADA6NGE7 173 aa23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 ZNF860A6NHJ4 632 aa23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 LRATO95237 230 aa23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 ATXN8OSP0DMR3 200 aa23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 ALOX12P18054 663 aa23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 CSRP1P21291 193 aaKnown RBP23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 GPX3P22352 226 aa23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 CCKBRP32239 447 aa23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 GSTA3Q16772 222 aa23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 ISXQ2M1V0 245 aa23.46■■□□□ 1.35
LDLRAD3-203ENST00000528989 ABHD13Q7L211 337 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms