RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SNF8Q96H20 258 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 TREX2Q9BQ50 279 aaPredicted RBP24.23■■□□□ 1.47
PVT1-219ENST00000523427 HAUS8Q9BT25 410 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 NECTIN3Q9NQS3 549 aa24.23■■□□□ 1.47
PVT1-219ENST00000523427 PSMD12O00232 456 aaPredicted RBP24.22■■□□□ 1.47
PVT1-219ENST00000523427 CD1EP15812 388 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 TRHRP34981 398 aaPredicted RBP24.22■■□□□ 1.47
PVT1-219ENST00000523427 NR0B1P51843 470 aaKnown RBP24.22■■□□□ 1.47
PVT1-219ENST00000523427 UGT3A1Q6NUS8 523 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 PAQR3Q6TCH7 311 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 CYP4Z2PQ8N1L4 340 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 OR52N2Q8NGI0 321 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 CALML6Q8TD86 181 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 SREK1Q8WXA9 508 aaKnown RBP24.22■■□□□ 1.47
PVT1-219ENST00000523427 RND1Q92730 232 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 LINGO1Q96FE5 620 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 ZNF559Q9BR84 538 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 SPNS1Q9H2V7 528 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 TRIM45Q9H8W5 580 aaPredicted RBP24.22■■□□□ 1.47
PVT1-219ENST00000523427 KCNJ16Q9NPI9 418 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 ARL15Q9NXU5 204 aa24.22■■□□□ 1.47
PVT1-219ENST00000523427 PABPN1LA6NDY0 278 aaKnown RBP24.21■■□□□ 1.47
PVT1-219ENST00000523427 EIF3FO00303 357 aaPredicted RBP24.21■■□□□ 1.47
PVT1-219ENST00000523427 CHRNB4P30926 498 aa24.21■■□□□ 1.47
PVT1-219ENST00000523427 DHX9Q08211 1270 aaKnown RBP24.21■■□□□ 1.47
PVT1-219ENST00000523427 PWP1Q13610 501 aa24.21■■□□□ 1.47
PVT1-219ENST00000523427 LRRC8EQ6NSJ5 796 aa24.21■■□□□ 1.47
PVT1-219ENST00000523427 QSOX2Q6ZRP7 698 aa24.21■■□□□ 1.47
PVT1-219ENST00000523427 ABHD13Q7L211 337 aa24.21■■□□□ 1.47
PVT1-219ENST00000523427 MDGA2Q7Z553 956 aa24.21■■□□□ 1.47
PVT1-219ENST00000523427 TBC1D19Q8N5T2 526 aa24.21■■□□□ 1.47
PVT1-219ENST00000523427 NFAM1Q8NET5 270 aaPredicted RBP24.21■■□□□ 1.47
PVT1-219ENST00000523427 ABHD11Q8NFV4 315 aa24.21■■□□□ 1.47
PVT1-219ENST00000523427 LILRB4Q8NHJ6 448 aa24.21■■□□□ 1.47
PVT1-219ENST00000523427 SERPINB12Q96P63 405 aa24.21■■□□□ 1.47
PVT1-219ENST00000523427 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.2■■□□□ 1.46
PVT1-219ENST00000523427 TRBC2A0A5B9 178 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 CDK2AP1O14519 115 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 MAGEA6P43360 314 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 TIAL1Q01085 375 aaKnown RBP eCLIP24.2■■□□□ 1.466e-7■■■■□ 19.6
PVT1-219ENST00000523427 PMPCAQ10713 525 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 MYBPHQ13203 477 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 CSHL1Q14406 222 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 ARMC3Q5W041 872 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 AGGF1Q8N302 714 aaeCLIP24.2■■□□□ 1.46
PVT1-219ENST00000523427 ARMC2Q8NEN0 867 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 UTP15Q8TED0 518 aaKnown RBP24.2■■□□□ 1.46
PVT1-219ENST00000523427 TSNARE1Q96NA8 513 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 OR4K3Q96R72 315 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 TP63Q9H3D4 680 aaPredicted RBP24.2■■□□□ 1.46
PVT1-219ENST00000523427 XAB2Q9HCS7 855 aaKnown RBP24.2■■□□□ 1.46
PVT1-219ENST00000523427 PRDM9Q9NQV7 894 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 PNO1Q9NRX1 252 aaKnown RBP24.2■■□□□ 1.46
PVT1-219ENST00000523427 TAS2R13Q9NYV9 303 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 ZFATQ9P243 1243 aa24.2■■□□□ 1.46
PVT1-219ENST00000523427 TCRBV16S1A1N1A0A5B0 115 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 CTAGE15A4D2H0 777 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 FOXO6A8MYZ6 492 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 ITGA10O75578 1167 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 MYO1DO94832 1006 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 TOXO94900 526 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 GUCA1CO95843 209 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 MLNP12872 115 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 IGFBP2P18065 325 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 CLCN2P51788 898 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 PGGT1BP53609 377 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 SP140Q13342 867 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 RBM20Q5T481 1227 aaKnown RBP24.19■■□□□ 1.46
PVT1-219ENST00000523427 ARHGAP11AQ6P4F7 1023 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 C16orf47Q6ZP98 133 aaPredicted RBP24.19■■□□□ 1.46
PVT1-219ENST00000523427 CTAGE6Q86UF2 777 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 OR4K1Q8NGD4 311 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 FAM167BQ9BTA0 163 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 KLHL31Q9H511 634 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 LIN28AQ9H9Z2 209 aaKnown RBP24.19■■□□□ 1.46
PVT1-219ENST00000523427 LZTFL1Q9NQ48 299 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 HOMER3Q9NSC5 361 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 KCMF1Q9P0J7 381 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 TNFRSF10DQ9UBN6 386 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 ZFP69BQ9UJL9 534 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 ERVK-11Q9UQG0 969 aa24.19■■□□□ 1.46
PVT1-219ENST00000523427 SLC16A5O15375 505 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 RNH1P13489 461 aaKnown RBP24.18■■□□□ 1.46
PVT1-219ENST00000523427 CDKN2DP55273 166 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 NUP107P57740 925 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 PLGLB1Q02325 96 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 DUPD1Q68J44 220 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 LMNTD2Q8IXW0 634 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.18■■□□□ 1.46
PVT1-219ENST00000523427 OR5M3Q8NGP4 307 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 C16orf52Q8NHV5 167 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 NT5CQ8TCD5 201 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 NEIL2Q969S2 332 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 SEC16BQ96JE7 1060 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 NAV3Q8IVL0 2385 aa24.18■■□□□ 1.46
PVT1-219ENST00000523427 FAM166BA8MTA8 275 aa24.17■■□□□ 1.46
PVT1-219ENST00000523427 NPIPA2E9PIF3 369 aa24.17■■□□□ 1.46
PVT1-219ENST00000523427 NPIPA3F8WFD2 350 aa24.17■■□□□ 1.46
PVT1-219ENST00000523427 SCTRP47872 440 aa24.17■■□□□ 1.46
PVT1-219ENST00000523427 TFF3Q07654 80 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms