RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 MAGEB16A2A368 324 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 OR1F1O43749 312 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 C8GP07360 202 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 HOXD4P09016 255 aaPredicted RBP21.22■□□□□ 0.99
PVT1-218ENST00000523328 ZNF888P0CJ79 500 aaPredicted RBP21.22■□□□□ 0.99
PVT1-218ENST00000523328 DNAJA1P31689 397 aaKnown RBP21.22■□□□□ 0.99
PVT1-218ENST00000523328 CCR8P51685 355 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 SKP1P63208 163 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 SP140Q13342 867 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 PHKG1Q16816 387 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 LRRC8EQ6NSJ5 796 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 NIPAL1Q6NVV3 410 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 ARHGAP11AQ6P4F7 1023 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 MDGA2Q7Z553 956 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 TMEM200AQ86VY9 491 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 CCDC71Q8IV32 467 aaPredicted RBP21.22■□□□□ 0.99
PVT1-218ENST00000523328 NRGNQ92686 78 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 HAUS8Q9BT25 410 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 NECTIN3Q9NQS3 549 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 KCNN3Q9UGI6 736 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 FBXO5Q9UKT4 447 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 GUCA1BQ9UMX6 200 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 TRBC2A0A5B9 178 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 A8MUA0 341 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 NADKO95544 446 aaPredicted RBP21.21■□□□□ 0.99
PVT1-218ENST00000523328 FGGP02679 453 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 VPS41P49754 854 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 GPR85P60893 370 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 STRA8Q7Z7C7 330 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 LMNTD2Q8IXW0 634 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 CYP4Z2PQ8N1L4 340 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 NT5CQ8TCD5 201 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 PYCR2Q96C36 320 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 SEC16BQ96JE7 1060 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 OR4K3Q96R72 315 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 SPNS1Q9H2V7 528 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 PRDM9Q9NQV7 894 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 TRMT6Q9UJA5 497 aaKnown RBP21.21■□□□□ 0.99
PVT1-218ENST00000523328 MAP1AP78559 2803 aaPredicted RBP21.21■□□□□ 0.99
PVT1-218ENST00000523328 EML6Q6ZMW3 1958 aa21.21■□□□□ 0.99
PVT1-218ENST00000523328 ABCA4P78363 2273 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 SDR42E2A6NKP2 422 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 USP27XA6NNY8 438 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 SLC16A5O15375 505 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 PDE9AO76083 593 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 SERPIND1P05546 499 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 MLNP12872 115 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 CD99P14209 185 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 IST1P53990 364 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 NUP107P57740 925 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 DHX9Q08211 1270 aaKnown RBP21.2■□□□□ 0.98
PVT1-218ENST00000523328 PMPCAQ10713 525 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 KIAA0408Q6ZU52 694 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 ABHD13Q7L211 337 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 AGGF1Q8N302 714 aaeCLIP21.2■□□□□ 0.98
PVT1-218ENST00000523328 UTP15Q8TED0 518 aaKnown RBP21.2■□□□□ 0.98
PVT1-218ENST00000523328 SNF8Q96H20 258 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 DEPPQ9NTK1 212 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 C20orf96Q9NUD7 363 aaPredicted RBP21.2■□□□□ 0.98
PVT1-218ENST00000523328 ZFP69BQ9UJL9 534 aa21.2■□□□□ 0.98
PVT1-218ENST00000523328 ZNF223Q9UK11 482 aaPredicted RBP21.2■□□□□ 0.98
PVT1-218ENST00000523328 ANKHD1Q8IWZ3 2542 aaKnown RBP21.2■□□□□ 0.98
PVT1-218ENST00000523328 TRBV11-1A0A0K0K1C0 115 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 CTAGE15A4D2H0 777 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 ITGA10O75578 1167 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 HOXB4P17483 251 aaPredicted RBP21.19■□□□□ 0.98
PVT1-218ENST00000523328 SCTRP47872 440 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 RGS4P49798 205 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 CLCN2P51788 898 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 RGS1Q08116 209 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 GPS1Q13098 491 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 CATSPEREQ5SY80 951 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 CES4AQ5XG92 561 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 CTAGE6Q86UF2 777 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 PALM2Q8IXS6 379 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 TMEM156Q8N614 296 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 B3GNT7Q8NFL0 401 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 OR56A3Q8NH54 315 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 CALML6Q8TD86 181 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 MAIP1Q8WWC4 291 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 SERPINB12Q96P63 405 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 NDNQ99608 321 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 CXXC4Q9H2H0 198 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 CLK4Q9HAZ1 481 aaKnown RBP21.19■□□□□ 0.98
PVT1-218ENST00000523328 ZFATQ9P243 1243 aa21.19■□□□□ 0.98
PVT1-218ENST00000523328 FAM221AA4D161 298 aa21.18■□□□□ 0.98
PVT1-218ENST00000523328 SMIM10L1P0DMW3 83 aa21.18■□□□□ 0.98
PVT1-218ENST00000523328 RNH1P13489 461 aaKnown RBP21.18■□□□□ 0.98
PVT1-218ENST00000523328 HYAL2Q12891 473 aa21.18■□□□□ 0.98
PVT1-218ENST00000523328 DUPD1Q68J44 220 aa21.18■□□□□ 0.98
PVT1-218ENST00000523328 UGT3A1Q6NUS8 523 aa21.18■□□□□ 0.98
PVT1-218ENST00000523328 PAQR3Q6TCH7 311 aa21.18■□□□□ 0.98
PVT1-218ENST00000523328 MYO1HQ8N1T3 1032 aa21.18■□□□□ 0.98
PVT1-218ENST00000523328 MCUQ8NE86 351 aa21.18■□□□□ 0.98
PVT1-218ENST00000523328 SMIM10Q96HG1 83 aa21.18■□□□□ 0.98
PVT1-218ENST00000523328 SLC6A16Q9GZN6 736 aa21.18■□□□□ 0.98
PVT1-218ENST00000523328 DEFB127Q9H1M4 99 aa21.18■□□□□ 0.98
PVT1-218ENST00000523328 C4orf51C9J302 202 aa21.17■□□□□ 0.98
PVT1-218ENST00000523328 KLK8O60259 260 aa21.17■□□□□ 0.98
PVT1-218ENST00000523328 AHRP35869 848 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms