RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 CAMKVQ8NCB2 501 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 NLGN4YQ8NFZ3 816 aaPredicted RBP14.56□□□□□ -0.08
LSM1-203ENST00000520755 SNIP1Q8TAD8 396 aaKnown RBP14.56□□□□□ -0.08
LSM1-203ENST00000520755 SLC13A3Q8WWT9 602 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 MAELQ96JY0 434 aaKnown RBP14.56□□□□□ -0.08
LSM1-203ENST00000520755 C10orf90Q96M02 699 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 EBF4Q9BQW3 602 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 ZNF717Q9BY31 904 aaPredicted RBP14.56□□□□□ -0.08
LSM1-203ENST00000520755 SPRY4Q9C004 299 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 OR51B5Q9H339 312 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 KLHL31Q9H511 634 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 BRF2Q9HAW0 419 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 KCNK13Q9HB14 408 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 CUTCQ9NTM9 273 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 TXLNGQ9NUQ3 528 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 DHCR7Q9UBM7 475 aaKnown RBP14.56□□□□□ -0.08
LSM1-203ENST00000520755 NDOR1Q9UHB4 597 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 SRPK3Q9UPE1 567 aa14.56□□□□□ -0.08
LSM1-203ENST00000520755 CEP295Q9C0D2 2601 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 CCDC88CQ9P219 2028 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 ATP6AP2A0A1C7CYW4 349 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 FITM1A5D6W6 292 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 GMNCA6NCL1 334 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 LRIT2A6NDA9 550 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 SRRM3A6NNA2 597 aaPredicted RBP14.55□□□□□ -0.08
LSM1-203ENST00000520755 NPIPB8E9PQR5 432 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 TXNDC9O14530 226 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 ATP6AP2O75787 350 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 CHEK2O96017 543 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 SERPINA6P08185 405 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 SLC35G6P0C7Q6 338 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 CCNYL3P0C7X3 344 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 PRR35P0CG20 571 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 HSD3B1P14060 373 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 ALAS2P22557 587 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 HSD3B2P26439 372 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 ARSFP54793 590 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 TBL3Q12788 808 aaKnown RBP14.55□□□□□ -0.08
LSM1-203ENST00000520755 SF3A3Q12874 501 aaKnown RBP eCLIP14.55□□□□□ -0.08
LSM1-203ENST00000520755 FAM214AQ32MH5 1076 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 TOR1AIP1Q5JTV8 583 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 KHDRBS2Q5VWX1 349 aaKnown RBP14.55□□□□□ -0.08
LSM1-203ENST00000520755 RHBDD2Q6NTF9 364 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 UBE3DQ7Z6J8 389 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 CACNA2D3Q8IZS8 1091 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 AFAP1L2Q8N4X5 818 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 DTWD1Q8N5C7 304 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 METTL27Q8N6F8 245 aaPredicted RBP14.55□□□□□ -0.08
LSM1-203ENST00000520755 ZNF248Q8NDW4 579 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 TRPV3Q8NET8 790 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 KCNE4Q8WWG9 221 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 CCT6BQ92526 530 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 MR1Q95460 341 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 MS4A6EQ96DS6 147 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 DCBLD2Q96PD2 775 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 F2RL3Q96RI0 385 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 RABEP2Q9H5N1 569 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 LHX9Q9NQ69 397 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 VTI1BQ9UEU0 232 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 ADGRE2Q9UHX3 823 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 SLC12A4Q9UP95 1085 aa14.55□□□□□ -0.08
LSM1-203ENST00000520755 TMEM8BA6NDV4 472 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.54□□□□□ -0.08
LSM1-203ENST00000520755 SLCO1B7G3V0H7 640 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 MEN1O00255 615 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 SAP18O00422 153 aaKnown RBP14.54□□□□□ -0.08
LSM1-203ENST00000520755 PLPP1O14494 284 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 LSM1O15116 133 aaKnown RBP14.54□□□□□ -0.08
LSM1-203ENST00000520755 RSL1D1O76021 490 aaKnown RBP14.54□□□□□ -0.08
LSM1-203ENST00000520755 B3GALT4O96024 378 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 KLK3P07288 261 aaPredicted RBP14.54□□□□□ -0.08
LSM1-203ENST00000520755 PRPH2P23942 346 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 EPHA3P29320 983 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 RORAP35398 523 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 AQP5P55064 265 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 PHEXP78562 749 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 RGS1Q08116 209 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 PWP1Q13610 501 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 MAP7Q14244 749 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 MUM1Q2TAK8 710 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 DEPDC1Q5TB30 811 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 YOD1Q5VVQ6 348 aaPredicted RBP14.54□□□□□ -0.08
LSM1-203ENST00000520755 TMEM214Q6NUQ4 689 aaKnown RBP14.54□□□□□ -0.08
LSM1-203ENST00000520755 EPGNQ6UW88 154 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 DTX1Q86Y01 620 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 DSELQ8IZU8 1212 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 ESX1Q8N693 406 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 IL22RA1Q8N6P7 574 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 GBP7Q8N8V2 638 aaPredicted RBP14.54□□□□□ -0.08
LSM1-203ENST00000520755 ZCCHC10Q8TBK6 192 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 C10orf82Q8WW14 230 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 NKD1Q969G9 470 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 CMTM7Q96FZ5 175 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 APIPQ96GX9 242 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 OR52B2Q96RD2 323 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 SORBS1Q9BX66 1292 aaKnown RBP14.54□□□□□ -0.08
LSM1-203ENST00000520755 MRPL1Q9BYD6 325 aaKnown RBP14.54□□□□□ -0.08
LSM1-203ENST00000520755 FAM107BQ9H098 131 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 EPN3Q9H201 632 aa14.54□□□□□ -0.08
LSM1-203ENST00000520755 WDR55Q9H6Y2 383 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms