RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 TMEM26Q6ZUK4 368 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 IL17RELQ6ZVW7 336 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CENPUQ71F23 418 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANO5Q75V66 913 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC80Q76M96 950 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DPPA4Q7L190 304 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MEPCEQ7L2J0 689 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CENPQQ7L2Z9 268 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC16A9Q7RTY1 509 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRPM8Q7Z2W7 1104 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DGLUCYQ7Z3D6 616 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 C16orf62Q7Z3J2 963 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNF144BQ7Z419 303 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRMT11Q7Z4G4 463 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MDGA2Q7Z553 956 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 IRF2BP2Q7Z5L9 587 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPR141Q7Z602 305 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MTERF4Q7Z6M4 381 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PIGWQ7Z7B1 504 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LUZP2Q86TE4 346 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ASPGQ86U10 573 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SERPINA11Q86U17 422 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC190Q86UF4 302 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CUZD1Q86UP6 607 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HAPLN4Q86UW8 402 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 WDR5BQ86VZ2 330 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM228AQ86W67 206 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 AMIGO1Q86WK6 493 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PAQR7Q86WK9 346 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NR2C2APQ86WQ0 139 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CDR2LQ86X02 465 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHSY1Q86X52 802 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MEX3DQ86XN8 651 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ERO1BQ86YB8 467 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NRROSQ86YC3 692 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TDRPQ86YL5 185 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KLBQ86Z14 1044 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CBWD2Q8IUF1 395 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRRC49Q8IUZ0 686 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM219AQ8IW50 185 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 AQP12AQ8IXF9 295 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC36Q8IYA8 594 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF595Q8IYB9 648 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MICU2Q8IYU8 434 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SYCE1Q8N0S2 351 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 C1orf87Q8N0U7 546 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF444Q8N0Y2 327 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRRC75A-AS1Q8N1F1 130 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARHGAP24Q8N264 748 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 UBE2J2Q8N2K1 259 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC43A2Q8N370 569 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 RYBPQ8N488 228 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 FBXO39Q8N4B4 442 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPATA6LQ8N4H0 392 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PAQR4Q8N4S7 273 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CERS5Q8N5B7 392 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC25A41Q8N5S1 370 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 COMMD1Q8N668 190 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZBTB2Q8N680 514 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GCSAMQ8N6F7 178 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 EMC1Q8N766 993 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRIML2Q8N7C3 387 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LINC00469Q8N7U9 141 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CEP112Q8N8E3 955 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF321PQ8N8H1 164 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAB21L3Q8N8X9 362 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 EXD3Q8N9H8 876 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 WDSUB1Q8N9V3 476 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DNAAF3Q8N9W5 541 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 L3MBTL4Q8NA19 623 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC63Q8NA47 563 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MINDY2Q8NBR6 621 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC38A9Q8NBW4 561 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SCCPDHQ8NBX0 429 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KIAA0895Q8NCT3 520 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PPFIBP2Q8ND30 876 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF248Q8NDW4 579 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MCPH1Q8NEM0 835 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRPV1Q8NER1 839 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPATA4Q8NEY3 305 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR4C5Q8NGB2 326 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR4N2Q8NGD1 307 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR9K2Q8NGE7 335 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR52N4Q8NGI2 321 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR1J2Q8NGS2 313 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR9A1PQ8NGU1 263 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LILRB4Q8NHJ6 448 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CLHC1Q8NHS4 586 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HUS1BQ8NHY5 278 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM81AQ8TBF8 368 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TBC1D16Q8TBP0 767 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 WDR20Q8TBZ3 569 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRMT10AQ8TBZ6 339 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HM13Q8TCT9 377 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF398Q8TD17 642 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNASE8Q8TDE3 154 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACMSDQ8TDX5 336 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PAQR8Q8TEZ7 354 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PPP4R1Q8TF05 950 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms