RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 UBL7Q96S82 380 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 WDR77Q9BQA1 342 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 HAUS8Q9BT25 410 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 NDC1Q9BTX1 674 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 SORBS1Q9BX66 1292 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 DNAJC11Q9NVH1 559 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 CD274Q9NZQ7 290 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 TXNDC16Q9P2K2 825 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 PSMC3IPQ9P2W1 217 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 FETUBQ9UGM5 382 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 SERTAD3Q9UJW9 196 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 PCTPQ9UKL6 214 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 SNX7Q9UNH6 387 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 FARSAQ9Y285 508 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 ACOT9Q9Y305 439 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 PTRH2Q9Y3E5 179 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 AP1M2Q9Y6Q5 423 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 UBR5O95071 2799 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 A0A1W2PQ72 361 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 ARGFXA6NJG6 315 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 SMIM23A6NLE4 172 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 OR1F1O43749 312 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 CCNT2O60583 730 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 SRPX2O60687 465 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 GALR3O60755 368 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 STK16O75716 305 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 CEACAM4O75871 244 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 KLHL18O94889 574 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 NSA2O95478 260 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 PROCP04070 461 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 NUDT17P0C025 328 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF888P0CJ79 500 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 C1GALT1C1LP0DN25 315 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 COX6A1P12074 109 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 BMP4P12644 408 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 ACPPP15309 386 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 TSPAN8P19075 237 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 FBLP22087 321 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 CCND1P24385 295 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 TYK2P29597 1187 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 EEF1DP29692 281 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 ARRB2P32121 409 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 OTX2P32243 289 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 MSH2P43246 934 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 PIK3CGP48736 1102 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 HNMTP50135 292 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 HTR6P50406 440 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 SERPINB9P50453 376 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 CCR8P51685 355 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 DCDP81605 110 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 KLC1Q07866 573 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 PCDH1Q08174 1060 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 PCBP2Q15366 365 aaKnown RBP eCLIP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 PDK4Q16654 411 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 ADPRMQ3LIE5 342 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 TAF1BQ53T94 588 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 RPS26P11Q5JNZ5 115 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 CDKL4Q5MAI5 379 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 TCHHL1Q5QJ38 904 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 MLIPQ5VWP3 458 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 SULT1C3Q6IMI6 304 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 CYB5D1Q6P9G0 228 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 KIRREL2Q6UWL6 708 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 OVCH1Q7RTY7 1134 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 GOLGA7Q7Z5G4 137 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF843Q8N446 348 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 MREGQ8N565 214 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 TTC29Q8NA56 475 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 STT3BQ8TCJ2 826 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF483Q8TF39 744 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 UBLCP1Q8WVY7 318 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 ATL1Q8WXF7 558 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 TSLPQ969D9 159 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 KIAA1143Q96AT1 154 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 ABHD17AQ96GS6 310 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 CABS1Q96KC9 395 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 CSF3RQ99062 836 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 MS4A8Q9BY19 250 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 PARD6BQ9BYG5 372 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 CD244Q9BZW8 370 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 PCBD2Q9H0N5 130 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 NMRAL1Q9HBL8 299 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 ZBTB20Q9HC78 741 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 IRAK4Q9NWZ3 460 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 CPSF2Q9P2I0 782 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 NDOR1Q9UHB4 597 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 TBK1Q9UHD2 729 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 ZFP69BQ9UJL9 534 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 CPAMD8Q8IZJ3 1885 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 SCN3AQ9NY46 2000 aa6.81□□□□□ -1.32
TOPBP1-207ENST00000509162 HELZ2Q9BYK8 2649 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 IGHV3-20A0A0C4DH32 117 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 G3V2L1 256 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 PYCARD-AS1I3L0S3 204 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 K7EPI3 171 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 RTCAO00442 366 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 DLX3O60479 287 aa6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 PRKRAO75569 313 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 IPO13O94829 963 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-207ENST00000509162 ITGB2P05107 769 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms