RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 CLEC3AO75596 197 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 CDC123O75794 336 aaPredicted RBP17.14■□□□□ 0.33
CLDND1-220ENST00000508902 RPS17P08708 135 aaKnown RBP17.14■□□□□ 0.33
CLDND1-220ENST00000508902 SFTPCP11686 197 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 EEF1DP29692 281 aaKnown RBP17.14■□□□□ 0.33
CLDND1-220ENST00000508902 SLCO1A2P46721 670 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 SOX8P57073 446 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 RUNX2Q13950 521 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 TUBB8Q3ZCM7 444 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 GRHL2Q6ISB3 625 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 ZNF793Q6ZN11 406 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 ASB18Q6ZVZ8 466 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 LAS2Q8IYD9 372 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 GALNT16Q8N428 558 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 TMEM52Q8NDY8 209 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 OR52B6Q8NGF0 335 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 UBLCP1Q8WVY7 318 aaPredicted RBP17.14■□□□□ 0.33
CLDND1-220ENST00000508902 NACC2Q96BF6 587 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 SMAD5Q99717 465 aaKnown RBP17.14■□□□□ 0.33
CLDND1-220ENST00000508902 CAPS2Q9BXY5 557 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 MS4A8Q9BY19 250 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 ZNF160Q9HCG1 818 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 CLDN16Q9Y5I7 305 aa17.14■□□□□ 0.33
CLDND1-220ENST00000508902 IGHV1-45A0A0A0MS14 117 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 FAM227AF5H4B4 570 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 PEX12O00623 359 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 RBP1P09455 135 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 PYGBP11216 843 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 ACPPP15309 386 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 CXCR2P25025 360 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 HNRNPFP52597 415 aaKnown RBP17.13■□□□□ 0.33
CLDND1-220ENST00000508902 RRADP55042 308 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 TRAF3Q13114 568 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 GTF2H2Q13888 395 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 TSNAXIP1Q2TAA8 658 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 NADK2Q4G0N4 442 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 GTF2H2CQ6P1K8 395 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 KLC3Q6P597 504 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 ABHD17CQ6PCB6 329 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 KRT78Q8N1N4 520 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 CA13Q8N1Q1 262 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 TBC1D19Q8N5T2 526 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 RBMXL3Q8N7X1 1067 aaKnown RBP17.13■□□□□ 0.33
CLDND1-220ENST00000508902 OR7G3Q8NG95 312 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 GAL3ST3Q96A11 431 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 MTBPQ96DY7 904 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 SCYL1Q96KG9 808 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 FER1L6-AS2Q96M78 137 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 CDK15Q96Q40 435 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 F2RL3Q96RI0 385 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 MRPL57Q9BQC6 102 aaKnown RBP17.13■□□□□ 0.33
CLDND1-220ENST00000508902 PITHD1Q9GZP4 211 aaPredicted RBP17.13■□□□□ 0.33
CLDND1-220ENST00000508902 MRPL46Q9H2W6 279 aaKnown RBP17.13■□□□□ 0.33
CLDND1-220ENST00000508902 ZNF225Q9UK10 706 aa17.13■□□□□ 0.33
CLDND1-220ENST00000508902 STX16-NPEPL1H3BU86 382 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 TGFBR3LH3BV60 316 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 STX16O14662 325 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 ERI3O43414 337 aaKnown RBP17.12■□□□□ 0.33
CLDND1-220ENST00000508902 H2AFYO75367 372 aaKnown RBP17.12■□□□□ 0.33
CLDND1-220ENST00000508902 SH3BGRLO75368 114 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 ETHE1O95571 254 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 HPP00738 406 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 IGHEP01854 428 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 HEXBP07686 556 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 EPB42P16452 691 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 BTN3A2P78410 334 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 MYBPC3Q14896 1274 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 ERCC6LQ2NKX8 1250 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 MINDY4Q4G0A6 757 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 WDR93Q6P2C0 686 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 ABHD13Q7L211 337 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 TDRPQ86YL5 185 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 PARP9Q8IXQ6 854 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 CCT6BQ92526 530 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 PSMF1Q92530 271 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 IMMP1LQ96LU5 166 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 TRIM4Q9C037 500 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 EPN3Q9H201 632 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 C12orf65Q9H3J6 166 aaKnown RBP17.12■□□□□ 0.33
CLDND1-220ENST00000508902 PRDM7Q9NQW5 492 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 GPR83Q9NYM4 423 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 RNF11Q9Y3C5 154 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 CSAG2Q9Y5P2 127 aa17.12■□□□□ 0.33
CLDND1-220ENST00000508902 SMIM23A6NLE4 172 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 RTCAO00442 366 aaKnown RBP17.11■□□□□ 0.33
CLDND1-220ENST00000508902 DLX3O60479 287 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 FHP07954 510 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 TSPAN8P19075 237 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 CERS1P27544 350 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 PIK3CGP48736 1102 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 PGDP52209 483 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 PLA2G16P53816 162 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 BTG2P78543 158 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 AIMP2Q13155 320 aaKnown RBP17.11■□□□□ 0.33
CLDND1-220ENST00000508902 ANKRD37Q7Z713 158 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 L3MBTL4Q8NA19 623 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 Q8NA96 180 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 CLEC1AQ8NC01 280 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 TTLQ8NG68 377 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 OR2L5Q8NG80 312 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms