RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 TMEM216Q9P0N5 145 aa18.28■□□□□ 0.52
LMNA-221ENST00000506981 ADGRE2Q9UHX3 823 aa18.28■□□□□ 0.52
LMNA-221ENST00000506981 ZNF490Q9ULM2 529 aaPredicted RBP18.28■□□□□ 0.52
LMNA-221ENST00000506981 A0A1W2PPM1 405 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 A8MT66 165 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 PSMD12O00232 456 aaPredicted RBP18.27■□□□□ 0.52
LMNA-221ENST00000506981 SOCS6O14544 535 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 KLHL41O60662 606 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 CYC1P08574 325 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 NUDT17P0C025 328 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 JAK1P23458 1154 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 IRAK1BP1Q5VVH5 260 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 FAAH2Q6GMR7 532 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 KIRREL2Q6UWL6 708 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 LAS2Q8IYD9 372 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 SRFBP1Q8NEF9 429 aaKnown RBP18.27■□□□□ 0.52
LMNA-221ENST00000506981 OR5T3Q8NGG3 340 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 PPP4R1Q8TF05 950 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 MS4A6EQ96DS6 147 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 NOL11Q9H8H0 719 aaKnown RBP18.27■□□□□ 0.52
LMNA-221ENST00000506981 ZNF71Q9NQZ8 489 aaPredicted RBP18.27■□□□□ 0.52
LMNA-221ENST00000506981 C19orf25Q9UFG5 118 aaPredicted RBP18.27■□□□□ 0.52
LMNA-221ENST00000506981 TP53TG5Q9Y2B4 290 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 PCDHGA11Q9Y5H2 935 aa18.27■□□□□ 0.52
LMNA-221ENST00000506981 LRIT2A6NDA9 550 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 A6NL46 340 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 CHST10O43529 356 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 ALOX12BO75342 701 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 CLDN9O95484 217 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 B3GALT4O96024 378 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 RPS17P08708 135 aaKnown RBP18.26■□□□□ 0.51
LMNA-221ENST00000506981 RNH1P13489 461 aaKnown RBP18.26■□□□□ 0.51
LMNA-221ENST00000506981 HNRNPH1P31943 449 aaKnown RBP18.26■□□□□ 0.51
LMNA-221ENST00000506981 CCT5P48643 541 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 PGDP52209 483 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 OLR1P78380 273 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 BTN3A2P78410 334 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 AIMP2Q13155 320 aaKnown RBP18.26■□□□□ 0.51
LMNA-221ENST00000506981 DDX39BQ13838 428 aaKnown RBP18.26■□□□□ 0.51
LMNA-221ENST00000506981 TCTN3Q6NUS6 607 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 SLC22A9Q8IVM8 553 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 OR2L5Q8NG80 312 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 OR7G3Q8NG95 312 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 OR11G2Q8NGC1 345 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 OR2W6PQ8NHA6 318 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 CENPKQ9BS16 269 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 RBCK1Q9BYM8 510 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 VN1R1Q9GZP7 353 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 GPR83Q9NYM4 423 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 PCTPQ9UKL6 214 aa18.26■□□□□ 0.51
LMNA-221ENST00000506981 PCDHGA9Q9Y5G4 932 aaKnown RBP18.26■□□□□ 0.51
LMNA-221ENST00000506981 HEMK1Q9Y5R4 338 aaPredicted RBP18.26■□□□□ 0.51
LMNA-221ENST00000506981 TLN1Q9Y490 2541 aaKnown RBP18.26■□□□□ 0.51
LMNA-221ENST00000506981 A0A0G2JN53 185 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 B3GALT2O43825 422 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 JRKO75564 520 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 HPP00738 406 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 C8orf89P0DMQ9 161 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 SMIM10L1P0DMW3 83 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 ATP5F1P24539 256 aaPredicted RBP18.25■□□□□ 0.51
LMNA-221ENST00000506981 PLA2G16P53816 162 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 EEF1A2Q05639 463 aaKnown RBP18.25■□□□□ 0.51
LMNA-221ENST00000506981 ADPRMQ3LIE5 342 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 ADNP2Q6IQ32 1131 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 CHSY3Q70JA7 882 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 VN1R5Q7Z5H4 357 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 GALNT16Q8N428 558 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 ZNF843Q8N446 348 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 ZNF473Q8WTR7 871 aaKnown RBP18.25■□□□□ 0.51
LMNA-221ENST00000506981 TBC1D20Q96BZ9 403 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 C8orf44Q96CB5 159 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 CMTM7Q96FZ5 175 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 SMIM10Q96HG1 83 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 MAGEB10Q96LZ2 347 aaPredicted RBP18.25■□□□□ 0.51
LMNA-221ENST00000506981 MS4A8Q9BY19 250 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 ROPN1BQ9BZX4 212 aaPredicted RBP18.25■□□□□ 0.51
LMNA-221ENST00000506981 ROGDIQ9GZN7 287 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 ROPN1Q9HAT0 212 aaPredicted RBP18.25■□□□□ 0.51
LMNA-221ENST00000506981 SEMA4BQ9NPR2 832 aaPredicted RBP18.25■□□□□ 0.51
LMNA-221ENST00000506981 RAB21Q9UL25 225 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 SPTA1P02549 2419 aa18.25■□□□□ 0.51
LMNA-221ENST00000506981 NSG1A0A0A6YYJ2 146 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 C4orf51C9J302 202 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 COPEO14579 308 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 CDC123O75794 336 aaPredicted RBP18.24■□□□□ 0.51
LMNA-221ENST00000506981 CEACAM4O75871 244 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 OTCP00480 354 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 FHP07954 510 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 SBK3P0C264 359 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 ITGA3P26006 1051 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 PIK3CBP42338 1070 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 RAP1GDS1P52306 607 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 MTTPP55157 894 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 HERVK_113P63132 956 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 CPSF6Q16630 551 aaKnown RBP eCLIP18.24■□□□□ 0.51
LMNA-221ENST00000506981 CCDC153Q494R4 210 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 TMEM35AQ53FP2 167 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 TTC19Q6DKK2 380 aaPredicted RBP18.24■□□□□ 0.51
LMNA-221ENST00000506981 ASB18Q6ZVZ8 466 aa18.24■□□□□ 0.51
LMNA-221ENST00000506981 CYP4X1Q8N118 509 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms