RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 PCNAP12004 261 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 IMPDH1P20839 514 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 MMP11P24347 488 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 OTX2P32243 289 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 ARL1P40616 181 aaPredicted RBP18.8■□□□□ 0.6
SNX25-204ENST00000506896 PIK3CBP42338 1070 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 NAA20P61599 178 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 SNRPNP63162 240 aaKnown RBP18.8■□□□□ 0.6
SNX25-204ENST00000506896 KLC1Q07866 573 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 ZNF844Q08AG5 666 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 NFATC3Q12968 1075 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 ADPRMQ3LIE5 342 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 KRT71Q3SY84 523 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 VWA2Q5GFL6 755 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 C10orf62Q5T681 223 aaPredicted RBP18.8■□□□□ 0.6
SNX25-204ENST00000506896 VN1R5Q7Z5H4 357 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 MRGPREQ86SM8 312 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 APLFQ8IW19 511 aaPredicted RBP18.8■□□□□ 0.6
SNX25-204ENST00000506896 SRRM1Q8IYB3 904 aaKnown RBP18.8■□□□□ 0.6
SNX25-204ENST00000506896 IQCKQ8N0W5 287 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 SRFBP1Q8NEF9 429 aaKnown RBP18.8■□□□□ 0.6
SNX25-204ENST00000506896 OR51Q1Q8NH59 317 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 ZNF473Q8WTR7 871 aaKnown RBP18.8■□□□□ 0.6
SNX25-204ENST00000506896 MS4A6EQ96DS6 147 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 SMIM10Q96HG1 83 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 APOPT1Q96IL0 206 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 FAR2Q96K12 515 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 CRB3Q9BUF7 120 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 REXO4Q9GZR2 422 aaKnown RBP18.8■□□□□ 0.6
SNX25-204ENST00000506896 KLHL31Q9H511 634 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 SOX17Q9H6I2 414 aaPredicted RBP18.8■□□□□ 0.6
SNX25-204ENST00000506896 STK38LQ9Y2H1 464 aa18.8■□□□□ 0.6
SNX25-204ENST00000506896 PEX12O00623 359 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 RDH16O75452 317 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 PLA2G2AP14555 144 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 HNRNPH1P31943 449 aaKnown RBP18.79■□□□□ 0.6
SNX25-204ENST00000506896 RAB8AP61006 207 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 MAT1AQ00266 395 aaKnown RBP18.79■□□□□ 0.6
SNX25-204ENST00000506896 GGTA1PQ4G0N0 100 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 TMEM35AQ53FP2 167 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 ZNF678Q5SXM1 525 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 TRIM40Q6P9F5 258 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 ZYG11AQ6WRX3 759 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 CHSY3Q70JA7 882 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 MED25Q71SY5 747 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 ZC3H7AQ8IWR0 971 aaKnown RBP18.79■□□□□ 0.6
SNX25-204ENST00000506896 TMEM102Q8N9M5 508 aaPredicted RBP18.79■□□□□ 0.6
SNX25-204ENST00000506896 BANPQ8N9N5 519 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 OR2L5Q8NG80 312 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 OR52B6Q8NGF0 335 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 L3HYPDHQ96EM0 354 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 CMTM7Q96FZ5 175 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 NSUN5Q96P11 429 aaKnown RBP18.79■□□□□ 0.6
SNX25-204ENST00000506896 OR1F2PQ96R84 312 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 SMC6Q96SB8 1091 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 ZBTB26Q9HCK0 441 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 PRM3Q9NNZ6 103 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 SEMA4BQ9NPR2 832 aaPredicted RBP18.79■□□□□ 0.6
SNX25-204ENST00000506896 HCN3Q9P1Z3 774 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 C3orf18Q9UK00 162 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 RNF11Q9Y3C5 154 aa18.79■□□□□ 0.6
SNX25-204ENST00000506896 G3V2L1 256 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 RGS16O15492 202 aaPredicted RBP18.78■□□□□ 0.6
SNX25-204ENST00000506896 ERI3O43414 337 aaKnown RBP18.78■□□□□ 0.6
SNX25-204ENST00000506896 SUPT7LO94864 414 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 BMP10O95393 424 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 MLYCDO95822 493 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 XCR1P46094 333 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 RRADP55042 308 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 CLCQ05315 142 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 TRAF3Q13114 568 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 RBBP7Q16576 425 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 CPSF6Q16630 551 aaKnown RBP eCLIP18.78■□□□□ 0.6
SNX25-204ENST00000506896 SYT16Q17RD7 645 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 ADNP2Q6IQ32 1131 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 LRIG3Q6UXM1 1119 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 SHISA6Q6ZSJ9 500 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 CCDC63Q8NA47 563 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 HUS1BQ8NHY5 278 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 ABHD17AQ96GS6 310 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 FER1L6-AS2Q96M78 137 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 TMEM237Q96Q45 408 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 CENPKQ9BS16 269 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 MS4A8Q9BY19 250 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 ROGDIQ9GZN7 287 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 PLLPQ9Y342 182 aa18.78■□□□□ 0.6
SNX25-204ENST00000506896 FFAR3O14843 346 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 GPR42O15529 346 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 TBX6O95947 436 aaPredicted RBP18.77■□□□□ 0.6
SNX25-204ENST00000506896 HEXBP07686 556 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 CPA3P15088 417 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 EMP2P54851 167 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 FOXL2P58012 376 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 UNC50Q53HI1 259 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 BEND6Q5SZJ8 279 aaPredicted RBP18.77■□□□□ 0.6
SNX25-204ENST00000506896 PPP1R32Q7Z5V6 425 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 MILR1Q7Z6M3 343 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 PRSS58Q8IYP2 241 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 ZIM3Q96PE6 472 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 KCNC2Q96PR1 638 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms