RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 HIST2H2AA3Q6FI13 130 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 KIRREL2Q6UWL6 708 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 MYLK4Q86YV6 388 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 L3MBTL4Q8NA19 623 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 UBE2E3Q969T4 207 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 IP6K3Q96PC2 410 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 MS4A8Q9BY19 250 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 RBCK1Q9BYM8 510 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 ADNPQ9H2P0 1102 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 C12orf65Q9H3J6 166 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 SEMA4BQ9NPR2 832 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 OR2W5A6NFC9 320 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 URADA6NGE7 173 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 G3V2L1 256 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 AGPSO00116 658 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 PPP6CO00743 305 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 CHST10O43529 356 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 UGDHO60701 494 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 ALOX12BO75342 701 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 C1QL1O75973 258 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 PROCP04070 461 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 TUBBP07437 444 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 TSPAN8P19075 237 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 TAC1P20366 129 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 ATP5F1P24539 256 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 CRHR1P34998 444 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 EMP2P54851 167 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 HERVK_113P63132 956 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 RBBP7Q16576 425 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 UNC50Q53HI1 259 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 DCAF10Q5QP82 559 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 MED25Q71SY5 747 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 TRABD2AQ86V40 505 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 TMEM102Q8N9M5 508 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 OR2L5Q8NG80 312 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 OR11G2Q8NGC1 345 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 NACC2Q96BF6 587 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 C8orf44Q96CB5 159 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 PEX11GQ96HA9 241 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 QRFPRQ96P65 431 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 F2RL3Q96RI0 385 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 TMEM109Q9BVC6 243 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 ERVK-6Q9BXR3 956 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 ROPN1BQ9BZX4 212 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 VN1R1Q9GZP7 353 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 REXO4Q9GZR2 422 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 ROPN1Q9HAT0 212 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 LANCL2Q9NS86 450 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 TUBD1Q9UJT1 453 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 FBXL4Q9UKA2 621 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 MKL2Q9ULH7 1088 aa17.23■□□□□ 0.35
PDLIM7-216ENST00000506537 H0YIV9 168 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 K7EM74 188 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 PEX12O00623 359 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 PLIN3O60664 434 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 SH3BGRLO75368 114 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 CLDN9O95484 217 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 IGHEP01854 428 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 HEXBP07686 556 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 CCNG1P51959 295 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 PLA2G16P53816 162 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 PRKAA2P54646 552 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 CDH13P55290 713 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 SKP1P63208 163 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 BTN3A2P78410 334 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 ZNF844Q08AG5 666 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 CPSF6Q16630 551 aaKnown RBP eCLIP17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 ZNF678Q5SXM1 525 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 FAAH2Q6GMR7 532 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 NIPAL1Q6NVV3 410 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 ABHD17CQ6PCB6 329 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 UBE3DQ7Z6J8 389 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 HUS1BQ8NHY5 278 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 ABHD17AQ96GS6 310 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 NTMT1Q9BV86 223 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 DMRT3Q9NQL9 472 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 TSC22D4Q9Y3Q8 395 aa17.22■□□□□ 0.35
PDLIM7-216ENST00000506537 COPEO14579 308 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 CDC123O75794 336 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 CEACAM4O75871 244 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 SERPINB1P30740 379 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 CCL11P51671 97 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 RRADP55042 308 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 DDX39BQ13838 428 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 ZRSR2Q15696 482 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 MINDY4Q4G0A6 757 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 LETMD1Q6P1Q0 360 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 TMEM205Q6UW68 189 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 ZYG11AQ6WRX3 759 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 ZNF793Q6ZN11 406 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 CA13Q8N1Q1 262 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 OR4F6Q8NGB9 312 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 WDR20Q8TBZ3 569 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 L3HYPDHQ96EM0 354 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 OR1F2PQ96R84 312 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 MTERF1Q99551 399 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 MKS1Q9NXB0 559 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 ZNF225Q9UK10 706 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 PCDHGA11Q9Y5H2 935 aa17.21■□□□□ 0.35
PDLIM7-216ENST00000506537 SPENQ96T58 3664 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms