RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 MYBPC1Q00872 1141 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 PTGR1Q14914 329 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 ITPRIPL2Q3MIP1 535 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 PRSS36Q5K4E3 855 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 NIPAL1Q6NVV3 410 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 CALHM3Q86XJ0 350 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 SLC44A2Q8IWA5 706 aaPredicted RBP7.13□□□□□ -1.27
PDGFC-203ENST00000502773 C1orf52Q8N6N3 182 aaKnown RBP7.13□□□□□ -1.27
PDGFC-203ENST00000502773 CHTF18Q8WVB6 975 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 TFGQ92734 400 aaPredicted RBP7.13□□□□□ -1.27
PDGFC-203ENST00000502773 COQ8BQ96D53 544 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 PKP4Q99569 1192 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 P2RY13Q9BPV8 354 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 FAIMQ9NVQ4 179 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 TAS2R9Q9NYW1 312 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 VAPAQ9P0L0 249 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 FZD4Q9ULV1 537 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 SNX7Q9UNH6 387 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 SLC9A8Q9Y2E8 581 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 CCL27Q9Y4X3 112 aa7.13□□□□□ -1.27
PDGFC-203ENST00000502773 A0A1W2PRB8 838 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 FAM47E-STBD1D6RA91 191 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 CAPN5O15484 640 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 TNFRSF21O75509 655 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 ZNF821O75541 412 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 SORBS2O94875 1100 aaKnown RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 EPHX1P07099 455 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 ZNF12P17014 697 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 GJA1P17302 382 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 ERVFC1P60507 584 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 PFN3P60673 137 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 IL1RL1Q01638 556 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 TCTN1Q2MV58 587 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 EML3Q32P44 896 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 ATAD3BQ5T9A4 648 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 OR4F3Q6IEY1 312 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 PLEKHM3Q6ZWE6 761 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 CBLL1Q75N03 491 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 OR7G3Q8NG95 312 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 FAM174AQ8TBP5 190 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 SPPL2AQ8TCT8 520 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 SCAMP4Q969E2 229 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 TRIM43Q96BQ3 446 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 CRELD1Q96HD1 420 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 NODALQ96S42 347 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 SGPP1Q9BX95 441 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 WDR26Q9H7D7 661 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 C3orf14Q9HBI5 128 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 GIMAP2Q9UG22 337 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 ENTPD4Q9Y227 616 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 MICAL3Q7RTP6 2002 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 KCNE1BA0A087WTH5 132 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 J3QRK9 145 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 TFAP2AP05549 437 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 CHRNB1P11230 501 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 C6P13671 934 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 IL12AP29459 219 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 TLX1P31314 330 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 SOAT1P35610 550 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 MAPK12P53778 367 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 GNG2P59768 71 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 ADARB1P78563 741 aaKnown RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 RGS1Q08116 209 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 GRSF1Q12849 480 aaKnown RBP eCLIP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 RUNX3Q13761 415 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 TMEM240Q5SV17 173 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 METTL4Q8N3J2 472 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 MINDY2Q8NBR6 621 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 WDR20Q8TBZ3 569 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 LKAAEAR1Q8TD35 194 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 CYB5D2Q8WUJ1 264 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 HTRA1Q92743 480 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 EID2BQ96D98 161 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 MSANTD3Q96H12 275 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 THAP10Q9P2Z0 257 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 IKZF3Q9UKT9 509 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 CDH7Q9ULB5 785 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 FAM25AB3EWG3 89 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 FAM25CB3EWG5 89 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 FAM25GB3EWG6 89 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 SNPHO15079 494 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 SLC22A1O15245 554 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 CISD3P0C7P0 127 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 NELFEP18615 380 aaKnown RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 IL12RB1P42701 662 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 KIAA0040Q15053 153 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 C21orf62-AS1Q17RA5 79 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 FBXO48Q5FWF7 155 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 RNF111Q6ZNA4 994 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 SLCO4C1Q6ZQN7 724 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 PARS2Q7L3T8 475 aaKnown RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 C16orf62Q7Z3J2 963 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 HDDC2Q7Z4H3 204 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 ZNF605Q86T29 641 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 BPHLQ86WA6 291 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 DCBLD1Q8N8Z6 715 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 RASGEF1AQ8N9B8 481 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 GOT1L1Q8NHS2 421 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 SLC29A1Q99808 456 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 WDR12Q9GZL7 423 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms