RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 AOC2O75106 756 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 TBX18O95935 607 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 ZNHIT3Q15649 155 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 SNAP47Q5SQN1 464 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 PM20D1Q6GTS8 502 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 B3GNT8Q7Z7M8 397 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 FUZQ9BT04 418 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 TRIM36Q9NQ86 728 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 MAT2BQ9NZL9 334 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 NUP50Q9UKX7 468 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 SYN3O14994 580 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 ELFN1P0C7U0 828 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 DNASE1P24855 282 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 DPP6P42658 865 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 TSPAN5P62079 268 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 C22orf42Q6IC83 251 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 C15orf40Q8WUR7 153 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 PGAP3Q96FM1 320 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 MNTQ99583 582 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 VAPAQ9P0L0 249 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 SCML2Q9UQR0 700 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 NUMBLQ9Y6R0 609 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 OR1D2P34982 312 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 MAGEA12P43365 314 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 ADARB1P78563 741 aaKnown RBP16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 UGT8Q16880 541 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 TRNP1Q6NT89 227 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 PGBD2Q6P3X8 592 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 EQTNQ9NQ60 294 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 NLKQ9UBE8 527 aa16.62■□□□□ 0.25
HMGXB3-201ENST00000502717 RPS17P08708 135 aaKnown RBP16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 SNRPD2P62316 118 aaKnown RBP16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 RPS24P62847 133 aaKnown RBP16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 CREB5Q02930 508 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 PCDH1Q08174 1060 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 TBCEQ15813 527 aaPredicted RBP16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 REEP3Q6NUK4 255 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 HSDL2Q6YN16 418 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 VTCN1Q7Z7D3 282 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 UHRF1Q96T88 793 aaPredicted RBP16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 FARSBQ9NSD9 589 aaKnown RBP16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 TREX1Q9NSU2 369 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 P2RX2Q9UBL9 471 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 TBC1D24Q9ULP9 559 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 ZNF195O14628 629 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 OR1I1O60431 355 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 JRKO75564 520 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 DNTTP04053 509 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 HTR6P50406 440 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 PRR5P85299 388 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 MAMDC4Q6UXC1 1216 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 CEP76Q8TAP6 659 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 OR51E2Q9H255 320 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 PCDH10Q9P2E7 1040 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 CACNG4Q9UBN1 327 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 CAPN5O15484 640 aaPredicted RBP16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 HLA-DQA2P01906 255 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 APODP05090 189 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 BCHEP06276 602 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 CCL5P13501 91 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 BIKQ13323 160 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 CHRNA6Q15825 494 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 PTRH1Q86Y79 214 aaKnown RBP16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 OR4C6Q8NH72 309 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 NEIL3Q8TAT5 605 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 CXorf40AQ8TE69 158 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 TMEM27Q9HBJ8 222 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 MARK1Q9P0L2 795 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 CEACAM20Q6UY09 585 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 RNF44Q7L0R7 432 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 SLC9A6Q92581 669 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 SNAPC3Q92966 411 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 IFT27Q9BW83 186 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 TTLL2Q9BWV7 592 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 OR51V1Q9H2C8 321 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 ABCD2Q9UBJ2 740 aa16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 FBXO9Q9UK97 447 aaPredicted RBP16.61■□□□□ 0.25
HMGXB3-201ENST00000502717 H7C2Y5 167 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 NFATC1O95644 943 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 PDYNP01213 254 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 HIST1H2ABP04908 130 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 ATAD3CQ5T2N8 411 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 ARL9Q6T311 187 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 GET4Q7L5D6 327 aaPredicted RBP16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 HIST3H2AQ7L7L0 130 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 HIST1H2ACQ93077 130 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 CERS4Q9HA82 394 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 CTPS2Q9NRF8 586 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 RHCGQ9UBD6 479 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 NDOR1Q9UHB4 597 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 SULT1C4O75897 302 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 ARL6IP5O75915 188 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 CHRNB1P11230 501 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 PTGES3Q15185 160 aaKnown RBP16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 MPPE1Q53F39 396 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 CLEC12AQ5QGZ9 265 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 KRT77Q7Z794 578 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 KAT2AQ92830 837 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 TNKS2Q9H2K2 1166 aa16.6■□□□□ 0.25
HMGXB3-201ENST00000502717 HEBP1Q9NRV9 189 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms