RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 SMAD5Q99717 465 aaKnown RBP12.09□□□□□ -0.47
HSPG2-213ENST00000498495 VN1R1Q9GZP7 353 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 REXO4Q9GZR2 422 aaKnown RBP12.09□□□□□ -0.47
HSPG2-213ENST00000498495 MRPL46Q9H2W6 279 aaKnown RBP12.09□□□□□ -0.47
HSPG2-213ENST00000498495 RHBGQ9H310 441 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 ZNF552Q9H707 407 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-213ENST00000498495 IPPKQ9H8X2 491 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 ACTR8Q9H981 624 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 ZNF160Q9HCG1 818 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 C5AR2Q9P296 337 aa12.09□□□□□ -0.47
HSPG2-213ENST00000498495 C19orf25Q9UFG5 118 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-213ENST00000498495 PCSK5Q92824 1860 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 A0A088AWK7 358 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 OR2W5A6NFC9 320 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 LRRC14BA6NHZ5 514 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 STX16-NPEPL1H3BU86 382 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 PSMD12O00232 456 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-213ENST00000498495 STX16O14662 325 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 ERI3O43414 337 aaKnown RBP12.08□□□□□ -0.48
HSPG2-213ENST00000498495 DPM1O60762 260 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 B4GALT2O60909 372 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 CDC123O75794 336 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-213ENST00000498495 SIX3O95343 332 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-213ENST00000498495 FHP07954 510 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 CYC1P08574 325 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 ICAM2P13598 275 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 ZNF10P21506 573 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-213ENST00000498495 JAK1P23458 1154 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 EEF1DP29692 281 aaKnown RBP12.08□□□□□ -0.48
HSPG2-213ENST00000498495 PLA2G16P53816 162 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 E2F2Q14209 437 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 VWA5B1Q5TIE3 1220 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 TRIM40Q6P9F5 258 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 GOLGA7Q7Z5G4 137 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 LCA5Q86VQ0 697 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 LAS2Q8IYD9 372 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 PLPP5Q8NEB5 264 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 SRFBP1Q8NEF9 429 aaKnown RBP12.08□□□□□ -0.48
HSPG2-213ENST00000498495 OR2L5Q8NG80 312 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 ACMSDQ8TDX5 336 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 THOC3Q96J01 351 aaKnown RBP12.08□□□□□ -0.48
HSPG2-213ENST00000498495 MESP1Q9BRJ9 268 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 RBCK1Q9BYM8 510 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 AICDAQ9GZX7 198 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 LHPPQ9H008 270 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 PPCSQ9HAB8 311 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 TMEM216Q9P0N5 145 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 ADGRE2Q9UHX3 823 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 MED13Q9UHV7 2174 aa12.08□□□□□ -0.48
HSPG2-213ENST00000498495 LOC102723996A0A087X1L8 192 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 IGHV1-45A0A0A0MS14 117 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 A0A0G2JN53 185 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 GOLGA8RI6L899 631 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 E2F3O00716 465 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 B3GALT2O43825 422 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 TGFB1P01137 390 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 SHBGP04278 402 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 PYGBP11216 843 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 COX6A1P12074 109 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 PLA2G2AP14555 144 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 TAC1P20366 129 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 HNRNPH1P31943 449 aaKnown RBP12.07□□□□□ -0.48
HSPG2-213ENST00000498495 ARL1P40616 181 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-213ENST00000498495 SLCO1A2P46721 670 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 VSNL1P62760 191 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 ACTN3Q08043 901 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-213ENST00000498495 ATMQ13315 3056 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 NSDHLQ15738 373 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 AGAP7PQ5VUJ5 663 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 ADNP2Q6IQ32 1131 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 GRHL2Q6ISB3 625 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 CHSY3Q70JA7 882 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 VN1R5Q7Z5H4 357 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 CPEB2Q7Z5Q1 589 aaKnown RBP12.07□□□□□ -0.48
HSPG2-213ENST00000498495 KBTBD2Q8IY47 623 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 OR7G3Q8NG95 312 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 ZNF473Q8WTR7 871 aaKnown RBP12.07□□□□□ -0.48
HSPG2-213ENST00000498495 TM9SF4Q92544 642 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 PTCHD1Q96NR3 888 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 AGAP4Q96P64 663 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 F2RL3Q96RI0 385 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 TUBB6Q9BUF5 446 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 NPLQ9BXD5 320 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-213ENST00000498495 ZNF700Q9H0M5 742 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 NOL11Q9H8H0 719 aaKnown RBP12.07□□□□□ -0.48
HSPG2-213ENST00000498495 RIC8BQ9NVN3 520 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 DCDC2Q9UHG0 476 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 PCDHGA11Q9Y5H2 935 aa12.07□□□□□ -0.48
HSPG2-213ENST00000498495 IGHV3-20A0A0C4DH32 117 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 A0A1W2PPM1 405 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 A0A1W2PQ72 361 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 SMIM23A6NLE4 172 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 C4orf51C9J302 202 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 PRMT3O60678 531 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 UGDHO60701 494 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 SH3BGRLO75368 114 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 CLDN9O95484 217 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 TBX6O95947 436 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-213ENST00000498495 GSTA1P08263 222 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 RNH1P13489 461 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms