RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SEC61BP60468 96 aaKnown RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SNRPEP62304 92 aaKnown RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SEMG2Q02383 582 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 ELP6Q0PNE2 266 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CCDC173Q0VFZ6 552 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 GAGE1Q13065 139 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 GAGE4Q13068 117 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CHIT1Q13231 466 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SGCGQ13326 291 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 KRT33BQ14525 404 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CERKLQ49MI3 558 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 FASTKD1Q53R41 847 aaKnown RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 AWAT1Q58HT5 328 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 C6orf10Q5SRN2 563 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 FNDC7Q5VTL7 733 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PLPP4Q5VZY2 271 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 MFSD12Q6NUT3 480 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 KCNV1Q6PIU1 500 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PRSS55Q6UWB4 352 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CD164L2Q6UWJ8 174 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 BTNL8Q6UX41 500 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PACS1Q6VY07 963 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 Q6ZPA2 131 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PLEKHM3Q6ZWE6 761 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 G2E3Q7L622 706 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC16A9Q7RTY1 509 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CCDC190Q86UF4 302 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 MEX3DQ86XN8 651 aaKnown RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 FOXP4Q8IVH2 680 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SERPINA12Q8IW75 414 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CCDC83Q8IWF9 413 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 MB21D2Q8IYB1 491 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PCDH20Q8N6Y1 951 aaKnown RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 EMC1Q8N766 993 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 RNF148Q8N7C7 305 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 L3MBTL4Q8NA19 623 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SIDT2Q8NBJ9 832 aaKnown RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 MINDY2Q8NBR6 621 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 OR52M1Q8NGK5 317 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 OR2AJ1Q8NGZ0 328 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 OR14A16Q8NHC5 309 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 ARRDC2Q8TBH0 407 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CCDC110Q8TBZ0 833 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM216AQ8WUB2 273 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CHURC1Q8WUH1 139 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC35F5Q8WV83 523 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 DNAAF4Q8WXU2 420 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SMPDL3BQ92485 455 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SHC3Q92529 594 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SEPT8Q92599 483 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PRCCQ92733 491 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 FGF11Q92914 225 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 ERGIC1Q969X5 290 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 DTD2Q96FN9 168 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 LRFN5Q96NI6 719 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PCDHB18PQ96TA0 734 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SPAG8Q99932 426 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SEMA3CQ99985 751 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PIGQQ9BRB3 760 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 ACPTQ9BZG2 426 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 TM6SF1Q9BZW5 370 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 WWTR1Q9GZV5 400 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 LSG1Q9H089 658 aaKnown RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 HHATLQ9HCP6 504 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 Q9N2K0 584 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CD93Q9NPY3 652 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 KLHL1Q9NR64 748 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 COX16Q9P0S2 106 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CGNQ9P2M7 1197 aaKnown RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 RHCGQ9UBD6 479 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC9A2Q9UBY0 812 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 TINAGQ9UJW2 476 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PADI3Q9ULW8 664 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 EXOC7Q9UPT5 735 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 STRAPQ9Y3F4 350 aaKnown RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 RNF114Q9Y508 228 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 KLK4Q9Y5K2 254 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PLXNA4Q9HCM2 1894 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 NUP205Q92621 2012 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 HERC2O95714 4834 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMEM129A0AVI4 362 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 DPPA5A6NC42 116 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 MAGEA13PA6NCF6 341 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 TRIM49BA6NDI0 452 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 OTOL1A6NHN0 477 aaPredicted RBP2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 ANKDD1BA6NHY2 528 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 CCDC169A6NNP5 214 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZNF814B7Z6K7 855 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 H0YIG0 161 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 AP3B1O00203 1094 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 HSPA12AO43301 675 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 XRCC3O43542 346 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 GPRIN2O60269 458 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 WISP2O76076 250 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 RHOBTB1O94844 696 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 OR6B1O95007 311 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 TPBGLP0DKB5 382 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 CCDC192P0DO97 292 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 TFPIP10646 304 aa2.3□□□□□ -2.04
CKS1BP2-201ENST00000497342 G6PDP11413 515 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms