RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 ZNF358Q9NW07 568 aa11.5□□□□□ -0.57
HDLBP-246ENST00000496569 PTBP2Q9UKA9 531 aaKnown RBP11.5□□□□□ -0.57
HDLBP-246ENST00000496569 CROCCQ5TZA2 2017 aa11.5□□□□□ -0.57
HDLBP-246ENST00000496569 MYOCOSA0A1B0GUC4 107 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 CLEC18AA5D8T8 446 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 A8MUA0 341 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 A8MUI8 341 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 SEMA7AO75326 666 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 STK16O75716 305 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 C2P06681 752 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 FHP07954 510 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 LTA4HP09960 611 aaKnown RBP11.49□□□□□ -0.57
HDLBP-246ENST00000496569 CTAGE8P0CG41 777 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 SMIM10L1P0DMW3 83 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 GNAZP19086 355 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 MAOAP21397 527 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 HNRNPFP52597 415 aaKnown RBP11.49□□□□□ -0.57
HDLBP-246ENST00000496569 BTN3A2P78410 334 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 NAB1Q13506 487 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 RUNX2Q13950 521 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 UBAP2LQ14157 1087 aaKnown RBP11.49□□□□□ -0.57
HDLBP-246ENST00000496569 ZNF169Q14929 603 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-246ENST00000496569 PDK4Q16654 411 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 XKR6Q5GH73 641 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 HIST2H2BCQ6DN03 193 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 SULT1C3Q6IMI6 304 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 MYO7BQ6PIF6 2116 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 PAPD4Q6PIY7 484 aaKnown RBP11.49□□□□□ -0.57
HDLBP-246ENST00000496569 CLEC18BQ6UXF7 455 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 TMIGD1Q6UXZ0 262 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 ABHD13Q7L211 337 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 TBC1D1Q86TI0 1168 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-246ENST00000496569 CTAGE4Q8IX94 777 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 CYP4X1Q8N118 509 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 CA13Q8N1Q1 262 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 PLD6Q8N2A8 252 aaKnown RBP11.49□□□□□ -0.57
HDLBP-246ENST00000496569 KIF2BQ8N4N8 673 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 CLEC18CQ8NCF0 446 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 GALNT11Q8NCW6 608 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 TMEM52Q8NDY8 209 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 SREK1Q8WXA9 508 aaKnown RBP11.49□□□□□ -0.57
HDLBP-246ENST00000496569 TM9SF4Q92544 642 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 TBC1D20Q96BZ9 403 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 SMIM10Q96HG1 83 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 VPS50Q96JG6 964 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 NPAS2Q99743 824 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 TUBB6Q9BUF5 446 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 NECTIN3Q9NQS3 549 aa11.49□□□□□ -0.57
HDLBP-246ENST00000496569 ZNF490Q9ULM2 529 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-246ENST00000496569 COPG1Q9Y678 874 aaKnown RBP11.49□□□□□ -0.57
HDLBP-246ENST00000496569 BLACEA4D250 179 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 TGFBR3LH3BV60 316 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 RTCAO00442 366 aaKnown RBP11.48□□□□□ -0.57
HDLBP-246ENST00000496569 ERI3O43414 337 aaKnown RBP11.48□□□□□ -0.57
HDLBP-246ENST00000496569 KERAO60938 352 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 WFS1O76024 890 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 WDPCPO95876 746 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 ALDOAP04075 364 aaKnown RBP11.48□□□□□ -0.57
HDLBP-246ENST00000496569 S100BP04271 92 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-246ENST00000496569 SERPINA6P08185 405 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 MTHFD2P13995 350 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 CERS1P27544 350 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 PPP2R1BP30154 601 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 GGT5P36269 586 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 PLA2G16P53816 162 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 OR4D2P58180 307 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 ARG2P78540 354 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 PMP22Q01453 160 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 ZNF33BQ06732 778 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 CHIT1Q13231 466 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 NSDHLQ15738 373 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 GSPT2Q8IYD1 628 aaKnown RBP11.48□□□□□ -0.57
HDLBP-246ENST00000496569 TCAIMQ8N3R3 496 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 FAM47BQ8NA70 645 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 TRPV3Q8NET8 790 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 OR1N1Q8NGS0 311 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 MS4A6EQ96DS6 147 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 F2RL3Q96RI0 385 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 CSF3RQ99062 836 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 FMO2Q99518 471 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 VPS11Q9H270 941 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 ACSS3Q9H6R3 686 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 NUDT4Q9NZJ9 180 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 MTRF1LQ9UGC7 380 aaKnown RBP11.48□□□□□ -0.57
HDLBP-246ENST00000496569 PCNX1Q96RV3 2341 aa11.48□□□□□ -0.57
HDLBP-246ENST00000496569 A0A096LPK6 155 aa11.47□□□□□ -0.57
HDLBP-246ENST00000496569 POC1B-GALNT4F8VUJ3 575 aa11.47□□□□□ -0.57
HDLBP-246ENST00000496569 E2F3O00716 465 aa11.47□□□□□ -0.57
HDLBP-246ENST00000496569 KLHL41O60662 606 aa11.47□□□□□ -0.57
HDLBP-246ENST00000496569 H2AFYO75367 372 aaKnown RBP11.47□□□□□ -0.57
HDLBP-246ENST00000496569 RNH1P13489 461 aaKnown RBP11.47□□□□□ -0.57
HDLBP-246ENST00000496569 CRABP2P29373 138 aa11.47□□□□□ -0.57
HDLBP-246ENST00000496569 MSH2P43246 934 aa11.47□□□□□ -0.57
HDLBP-246ENST00000496569 IRF8Q02556 426 aa11.47□□□□□ -0.57
HDLBP-246ENST00000496569 ACTN3Q08043 901 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-246ENST00000496569 CRLF3Q8IUI8 442 aa11.47□□□□□ -0.57
HDLBP-246ENST00000496569 BEST3Q8N1M1 668 aa11.47□□□□□ -0.57
HDLBP-246ENST00000496569 KRT78Q8N1N4 520 aa11.47□□□□□ -0.57
HDLBP-246ENST00000496569 FAM26EQ8N5C1 309 aa11.47□□□□□ -0.57
HDLBP-246ENST00000496569 PLPP5Q8NEB5 264 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms