RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	MAT1A	Q00266	395 aa	Known RBP	11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	MYBPC3	Q14896	1274 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	RASA2	Q15283	850 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	SYT16	Q17RD7	645 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	TUBB8	Q3ZCM7	444 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	DEFB134	Q4QY38	66 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	LIPJ	Q5W064	366 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	NDUFAF7	Q7L592	441 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	GSPT2	Q8IYD1	628 aa	Known RBP	11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	LAS2	Q8IYD9	372 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	PRSS58	Q8IYP2	241 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	GALNT16	Q8N428	558 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	TEX9	Q8N6V9	391 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	FDCSP	Q8NFU4	85 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	SMAD5	Q99717	465 aa	Known RBP	11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	MRPL46	Q9H2W6	279 aa	Known RBP	11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	ZNF358	Q9NW07	568 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	GPR83	Q9NYM4	423 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	C5AR2	Q9P296	337 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	ADGRE2	Q9UHX3	823 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	ANAPC2	Q9UJX6	822 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	TP53TG5	Q9Y2B4	290 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	ZNF451	Q9Y4E5	1061 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	ATRX	P46100	2492 aa		11.69	□□□□□ -0.54
MRPL55-233	ENST00000495899	SMG1	Q96Q15	3661 aa	Known RBP	11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899		A0A088AWK7	358 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	STX16-NPEPL1	H3BU86	382 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899		K7EM74	188 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	STX16	O14662	325 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	FFAR3	O14843	346 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	GPR42	O15529	346 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	SUV39H1	O43463	412 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	SMIM24	O75264	130 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	RDH16	O75452	317 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	ALPP	P05187	535 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	GSTA1	P08263	222 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	C8orf89	P0DMQ9	161 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	CD22	P20273	847 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	ZNF10	P21506	573 aa	Predicted RBP	11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	KLRB1	Q12918	225 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	ADPRM	Q3LIE5	342 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	C4orf48	Q5BLP8	95 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	TOR1AIP1	Q5JTV8	583 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	WDR93	Q6P2C0	686 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	MED27	Q6P2C8	311 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	TMEM205	Q6UW68	189 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	TDRP	Q86YL5	185 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	TMEM151A	Q8N4L1	468 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	METTL21A	Q8WXB1	218 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	GAL3ST3	Q96A11	431 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	TBC1D20	Q96BZ9	403 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	MS4A6E	Q96DS6	147 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	FAR2	Q96K12	515 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	SCYL1	Q96KG9	808 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	NPL	Q9BXD5	320 aa	Predicted RBP	11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	VN1R1	Q9GZP7	353 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	KLHL31	Q9H511	634 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	HCN3	Q9P1Z3	774 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	CPSF2	Q9P2I0	782 aa	Known RBP	11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	TSC22D4	Q9Y3Q8	395 aa		11.68	□□□□□ -0.54
MRPL55-233	ENST00000495899	HEATR5B	Q9P2D3	2071 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	NSG1	A0A0A6YYJ2	146 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899		A6NL46	340 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	E2F3	O00716	465 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	CHST10	O43529	356 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	ALOX12B	O75342	701 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	ICAM2	P13598	275 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	JAK1	P23458	1154 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	RAB8A	P61006	207 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	AP2B1	P63010	937 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	BTN3A2	P78410	334 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	TGM3	Q08188	693 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	GTF2H2	Q13888	395 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	MINDY4	Q4G0A6	757 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	TMEM35A	Q53FP2	167 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	VWA5B1	Q5TIE3	1220 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	IRAK1BP1	Q5VVH5	260 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	GRHL2	Q6ISB3	625 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	GTF2H2C	Q6P1K8	395 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	ATG14	Q6ZNE5	492 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	CHSY3	Q70JA7	882 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	VN1R5	Q7Z5H4	357 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	TEX19	Q8NA77	164 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	PLPP5	Q8NEB5	264 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	SRFBP1	Q8NEF9	429 aa	Known RBP	11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	OR2L5	Q8NG80	312 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	CCT6B	Q92526	530 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	REPS1	Q96D71	796 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	NUDT9	Q9BW91	350 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	ROGDI	Q9GZN7	287 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	REXO4	Q9GZR2	422 aa	Known RBP	11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	LHPP	Q9H008	270 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	ZNF700	Q9H0M5	742 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	IPPK	Q9H8X2	491 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	ACTR8	Q9H981	624 aa		11.67	□□□□□ -0.54
MRPL55-233	ENST00000495899	XPR1	Q9UBH6	696 aa		11.67	□□□□□ -0.54

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