RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 ATP6AP2O75787 350 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 FGF5P12034 268 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 FOLR1P15328 257 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 ADSLP30566 484 aaPredicted RBP12.89□□□□□ -0.35
APTX-231ENST00000494973 TIA1P31483 386 aaKnown RBP eCLIP12.89□□□□□ -0.35
APTX-231ENST00000494973 AVPR1BP47901 424 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 ATP4BP51164 291 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 MTTPP55157 894 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 CBX1P83916 185 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 MC2RQ01718 297 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 FOXM1Q08050 763 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 TBL3Q12788 808 aaKnown RBP12.89□□□□□ -0.35
APTX-231ENST00000494973 KCNAB1Q14722 419 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 C16orf72Q14CZ0 275 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 RPS6KA2Q15349 733 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 GPR19Q15760 415 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 LSM12Q3MHD2 195 aaKnown RBP12.89□□□□□ -0.35
APTX-231ENST00000494973 VWA5B1Q5TIE3 1220 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 OR4C11Q6IEV9 310 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 ADNP2Q6IQ32 1131 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 PRMT9Q6P2P2 845 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 ABHD17CQ6PCB6 329 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 CEACAM20Q6UY09 585 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 IKBIPQ70UQ0 350 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 COMMD6Q7Z4G1 85 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 B3GNT8Q7Z7M8 397 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 OR4N4Q8N0Y3 316 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 RCBTB1Q8NDN9 531 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 OR2T11Q8NH01 316 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 WDR36Q8NI36 951 aaKnown RBP12.89□□□□□ -0.35
APTX-231ENST00000494973 PROKR1Q8TCW9 393 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 CHTF18Q8WVB6 975 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 ADAMTS14Q8WXS8 1223 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 THOC1Q96FV9 657 aaKnown RBP12.89□□□□□ -0.35
APTX-231ENST00000494973 FCRL1Q96LA6 429 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 PPP1R36Q96LQ0 422 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 C3orf30Q96M34 536 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 OR6C1Q96RD1 312 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 F2RL3Q96RI0 385 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 SERINC2Q96SA4 455 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 DDA1Q9BW61 102 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 NPLQ9BXD5 320 aaPredicted RBP12.89□□□□□ -0.35
APTX-231ENST00000494973 ASPSCR1Q9BZE9 553 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 WDR55Q9H6Y2 383 aaPredicted RBP12.89□□□□□ -0.35
APTX-231ENST00000494973 DDX31Q9H8H2 851 aaKnown RBP12.89□□□□□ -0.35
APTX-231ENST00000494973 KCNK13Q9HB14 408 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 TXLNGQ9NUQ3 528 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 MS4A12Q9NXJ0 267 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 LOXL2Q9Y4K0 774 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 PCDHB3Q9Y5E6 796 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 PTGDR2Q9Y5Y4 395 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 ADAMTS20P59510 1910 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 MYO15AQ9UKN7 3530 aa12.89□□□□□ -0.35
APTX-231ENST00000494973 FRYLO94915 3013 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 BLACEA4D250 179 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 H0YIG0 161 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 PLPP1O14494 284 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 POLR1CO15160 346 aaPredicted RBP12.88□□□□□ -0.35
APTX-231ENST00000494973 P2RX6O15547 441 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 B3GALT2O43825 422 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 PRMT3O60678 531 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 PRAMEF10O60809 474 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 KCNK5O95279 499 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 NSA2O95478 260 aaKnown RBP12.88□□□□□ -0.35
APTX-231ENST00000494973 JMJD7P0C870 316 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 PIM1P11309 404 aaPredicted RBP12.88□□□□□ -0.35
APTX-231ENST00000494973 HIST1H1TP22492 207 aaPredicted RBP12.88□□□□□ -0.35
APTX-231ENST00000494973 HNRNPH1P31943 449 aaKnown RBP12.88□□□□□ -0.35
APTX-231ENST00000494973 MRPL19P49406 292 aaKnown RBP12.88□□□□□ -0.35
APTX-231ENST00000494973 GABPB1Q06547 395 aaPredicted RBP12.88□□□□□ -0.35
APTX-231ENST00000494973 ZNF763Q0D2J5 394 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 HYAL2Q12891 473 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 SQLEQ14534 574 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 HKDC1Q2TB90 917 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 TMEM164Q5U3C3 297 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 CYP20A1Q6UW02 462 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 RAB11FIP2Q7L804 512 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 TMEM126BQ8IUX1 230 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 C1orf52Q8N6N3 182 aaKnown RBP12.88□□□□□ -0.35
APTX-231ENST00000494973 C7orf57Q8NEG2 295 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 UTP15Q8TED0 518 aaKnown RBP12.88□□□□□ -0.35
APTX-231ENST00000494973 APIPQ96GX9 242 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 PRR11Q96HE9 360 aaPredicted RBP12.88□□□□□ -0.35
APTX-231ENST00000494973 C17orf62Q9BQA9 187 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 EBF4Q9BQW3 602 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 FAIM2Q9BWQ8 316 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 MRPL1Q9BYD6 325 aaKnown RBP12.88□□□□□ -0.35
APTX-231ENST00000494973 PRDM9Q9NQV7 894 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 CUTCQ9NTM9 273 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 PHF11Q9UIL8 331 aa12.88□□□□□ -0.35
APTX-231ENST00000494973 A0A1B0GX78 115 aa12.87□□□□□ -0.35
APTX-231ENST00000494973 GNG14A0A1W2PPG7 69 aa12.87□□□□□ -0.35
APTX-231ENST00000494973 SYNDIG1LA6NDD5 238 aa12.87□□□□□ -0.35
APTX-231ENST00000494973 E9PBE3 544 aa12.87□□□□□ -0.35
APTX-231ENST00000494973 DSCR3O14972 297 aa12.87□□□□□ -0.35
APTX-231ENST00000494973 KLHL41O60662 606 aa12.87□□□□□ -0.35
APTX-231ENST00000494973 CPNE3O75131 537 aaKnown RBP12.87□□□□□ -0.35
APTX-231ENST00000494973 ETHE1O95571 254 aa12.87□□□□□ -0.35
APTX-231ENST00000494973 ZNF888P0CJ79 500 aaPredicted RBP12.87□□□□□ -0.35
APTX-231ENST00000494973 SMIM10L1P0DMW3 83 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms