RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ZNF227Q86WZ6 799 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 DOLPP1Q86YN1 238 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 IGDCC3Q8IVU1 814 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 CHERPQ8IWX8 916 aaKnown RBP11.84□□□□□ -0.51
SKA1-205ENST00000494518 PPIL6Q8IXY8 311 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 GHDCQ8N2G8 530 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 RASGEF1CQ8N431 466 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 HORMAD2Q8N7B1 307 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 ABHD11Q8NFV4 315 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 OR56A3Q8NH54 315 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 SLC5A11Q8WWX8 675 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 NEIL2Q969S2 332 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 CFAP36Q96G28 342 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 KLHL31Q9H511 634 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 GPAMQ9HCL2 828 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 PPANQ9NQ55 473 aaKnown RBP11.84□□□□□ -0.51
SKA1-205ENST00000494518 NECTIN3Q9NQS3 549 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 PPP2R2CQ9Y2T4 447 aa11.84□□□□□ -0.51
SKA1-205ENST00000494518 A0A0G2JN53 185 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 SAGE2PA6NJ88 616 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 CDC40O60508 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
SKA1-205ENST00000494518 PRMT3O60678 531 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 AHSGP02765 367 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 IL10P22301 178 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 JAK1P23458 1154 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 SCTRP47872 440 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 CYB561P49447 251 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 MEOX1P50221 254 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 MLF1P58340 268 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 IL2P60568 153 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 CCZ1BP86790 482 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 CCZ1P86791 482 aaPredicted RBP11.83□□□□□ -0.52
SKA1-205ENST00000494518 REEP5Q00765 189 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 CSHL1Q14406 222 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 PPP1R7Q15435 360 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 CYP1B1Q16678 543 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 BBS9Q3SYG4 887 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 HECTD2Q5U5R9 776 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 DUPD1Q68J44 220 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 ABHD13Q7L211 337 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 TMPRSS11BQ86T26 416 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 CEP97Q8IW35 865 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 ANKRD53Q8N9V6 530 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 OR4K1Q8NGD4 311 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 UTP15Q8TED0 518 aaKnown RBP11.83□□□□□ -0.52
SKA1-205ENST00000494518 SDCCAG3Q96C92 435 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 PWWP2AQ96N64 755 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 OLFM1Q99784 485 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 ASIC3Q9UHC3 531 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 PPT2Q9UMR5 302 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 ASB1Q9Y576 335 aa11.83□□□□□ -0.52
SKA1-205ENST00000494518 TRBV11-1A0A0K0K1C0 115 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 PSMD12O00232 456 aaPredicted RBP11.82□□□□□ -0.52
SKA1-205ENST00000494518 PGRMC1O00264 195 aaKnown RBP11.82□□□□□ -0.52
SKA1-205ENST00000494518 PRRG2O14669 202 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 ADAM10O14672 748 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 TFECO14948 347 aaPredicted RBP11.82□□□□□ -0.52
SKA1-205ENST00000494518 TPOP07202 933 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 AGAP20933 346 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 SAT1P21673 171 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 NR0B1P51843 470 aaKnown RBP11.82□□□□□ -0.52
SKA1-205ENST00000494518 GPR85P60893 370 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 PWP1Q13610 501 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 RBBP5Q15291 538 aaKnown RBP11.82□□□□□ -0.52
SKA1-205ENST00000494518 TOR1AIP1Q5JTV8 583 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 SPANXN3Q5MJ09 141 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 TRMT10BQ6PF06 316 aaKnown RBP11.82□□□□□ -0.52
SKA1-205ENST00000494518 MEX3BQ6ZN04 569 aaKnown RBP11.82□□□□□ -0.52
SKA1-205ENST00000494518 QSOX2Q6ZRP7 698 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 CD163Q86VB7 1156 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 LRRC8AQ8IWT6 810 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 LGI4Q8N135 537 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 TBC1D19Q8N5T2 526 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 NT5CQ8TCD5 201 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 TMEM125Q96AQ2 219 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 FBXL8Q96CD0 374 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 CERS2Q96G23 380 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 PBKQ96KB5 322 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 TRIM54Q9BYV2 358 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 DEFB126Q9BYW3 111 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 FAM129AQ9BZQ8 928 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 AICDAQ9GZX7 198 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 PLAC1Q9HBJ0 212 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 ZFP69BQ9UJL9 534 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 DYRK1BQ9Y463 629 aa11.82□□□□□ -0.52
SKA1-205ENST00000494518 FREM3P0C091 2139 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 MAP1AP78559 2803 aaPredicted RBP11.81□□□□□ -0.52
SKA1-205ENST00000494518 ITPR3Q14573 2671 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 A0A1B0GTH9 108 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 MYOCOSA0A1B0GUC4 107 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 TCRBV16S1A1N1A0A5B0 115 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 NPEPPSL1A6NEC2 478 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 DNALI1O14645 258 aaPredicted RBP11.81□□□□□ -0.52
SKA1-205ENST00000494518 HS6ST1O60243 411 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 PDE9AO76083 593 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 MYO1DO94832 1006 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 RNH1P13489 461 aaKnown RBP11.81□□□□□ -0.52
SKA1-205ENST00000494518 PPP2R1BP30154 601 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 SSTR2P30874 369 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 AP1S2P56377 157 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms