RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 OR2L5Q8NG80 312 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 HUS1BQ8NHY5 278 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 STT3BQ8TCJ2 826 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 SNRNP27Q8WVK2 155 aaKnown RBP11.82□□□□□ -0.52
TRA2A-209ENST00000494255 MS4A6EQ96DS6 147 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 CATSPER2Q96P56 530 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 MTERF1Q99551 399 aaKnown RBP11.82□□□□□ -0.52
TRA2A-209ENST00000494255 MS4A8Q9BY19 250 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 PRORYQ9H606 182 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 COPS7BQ9H9Q2 264 aaPredicted RBP11.82□□□□□ -0.52
TRA2A-209ENST00000494255 TMBIM4Q9HC24 238 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 DMRT3Q9NQL9 472 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 HCN3Q9P1Z3 774 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 TRPS1Q9UHF7 1281 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 SNX6Q9UNH7 406 aa11.82□□□□□ -0.52
TRA2A-209ENST00000494255 CCDC88CQ9P219 2028 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 ZNF860A6NHJ4 632 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 PPP6CO00743 305 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 TM9SF1O15321 606 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 CNOT3O75175 753 aaKnown RBP11.81□□□□□ -0.52
TRA2A-209ENST00000494255 KLF7O75840 302 aaPredicted RBP11.81□□□□□ -0.52
TRA2A-209ENST00000494255 OR4F21O95013 312 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 TGFB1P01137 390 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 ZGLP1P0C6A0 271 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 SMIM10L1P0DMW3 83 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 ALDH3A1P30838 453 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 RAP1GDS1P52306 607 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 PLA2G16P53816 162 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 MAT1AQ00266 395 aaKnown RBP11.81□□□□□ -0.52
TRA2A-209ENST00000494255 SSPNQ14714 243 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 UGT8Q16880 541 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 ADPRMQ3LIE5 342 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 FRG2Q64ET8 278 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 FRMD7Q6ZUT3 714 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 PDSS2Q86YH6 399 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 PRSS58Q8IYP2 241 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 WDR20Q8TBZ3 569 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 CRELD1Q96HD1 420 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 SMIM10Q96HG1 83 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 FRG2BQ96QU4 278 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 F2RL3Q96RI0 385 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 SLC29A3Q9BZD2 475 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 ROGDIQ9GZN7 287 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 GSTO2Q9H4Y5 243 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 ELOVL6Q9H5J4 265 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 SOX17Q9H6I2 414 aaPredicted RBP11.81□□□□□ -0.52
TRA2A-209ENST00000494255 CLK4Q9HAZ1 481 aaKnown RBP11.81□□□□□ -0.52
TRA2A-209ENST00000494255 MID1IP1Q9NPA3 183 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 POLHQ9Y253 713 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 ANKRD11Q6UB99 2663 aaPredicted RBP11.81□□□□□ -0.52
TRA2A-209ENST00000494255 IGLV3-12A0A075B6K2 115 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 A0A0G2JN53 185 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 VSTM2BA6NLU5 285 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 MAGEB17A8MXT2 336 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 H3BQF6 201 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 FOXE1O00358 373 aaPredicted RBP11.81□□□□□ -0.52
TRA2A-209ENST00000494255 SH3BGRLO75368 114 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 ZWINTO95229 277 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 B3GALT4O96024 378 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 KRT6AP02538 564 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 KRT6BP04259 564 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 ENO1P06733 434 aaKnown RBP11.81□□□□□ -0.52
TRA2A-209ENST00000494255 IL10P22301 178 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 PTX3P26022 381 aaPredicted RBP11.81□□□□□ -0.52
TRA2A-209ENST00000494255 HMOX2P30519 316 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 OTX2P32243 289 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 KRT6CP48668 564 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 SYT16Q17RD7 645 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 ATP1A1-AS1Q5TC04 95 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 FAM69BQ5VUD6 431 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 KHDRBS2Q5VWX1 349 aaKnown RBP11.81□□□□□ -0.52
TRA2A-209ENST00000494255 SHISA6Q6ZSJ9 500 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 GOLGA6L1Q8N7Z2 621 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 CDYL2Q8N8U2 506 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 OR51Q1Q8NH59 317 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 MTFMTQ96DP5 389 aaKnown RBP11.81□□□□□ -0.52
TRA2A-209ENST00000494255 PKNOX2Q96KN3 472 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 IP6K3Q96PC2 410 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 KCNC2Q96PR1 638 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 SPSB2Q99619 263 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 TBCDQ9BTW9 1192 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 CRB3Q9BUF7 120 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 MECRQ9BV79 373 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 TGIF2Q9GZN2 237 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 AICDAQ9GZX7 198 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 OR51B5Q9H339 312 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 VIPAS39Q9H9C1 493 aa11.81□□□□□ -0.52
TRA2A-209ENST00000494255 DMXL2Q8TDJ6 3036 aa11.8□□□□□ -0.52
TRA2A-209ENST00000494255 A0A1B0GTL3 188 aa11.8□□□□□ -0.52
TRA2A-209ENST00000494255 C4orf51C9J302 202 aa11.8□□□□□ -0.52
TRA2A-209ENST00000494255 PSMD12O00232 456 aaPredicted RBP11.8□□□□□ -0.52
TRA2A-209ENST00000494255 CHST10O43529 356 aa11.8□□□□□ -0.52
TRA2A-209ENST00000494255 B3GALT2O43825 422 aa11.8□□□□□ -0.52
TRA2A-209ENST00000494255 CRCPO75575 148 aa11.8□□□□□ -0.52
TRA2A-209ENST00000494255 ESRRBO95718 433 aa11.8□□□□□ -0.52
TRA2A-209ENST00000494255 TBX6O95947 436 aaPredicted RBP11.8□□□□□ -0.52
TRA2A-209ENST00000494255 IGHEP01854 428 aa11.8□□□□□ -0.52
TRA2A-209ENST00000494255 RNH1P13489 461 aaKnown RBP11.8□□□□□ -0.52
TRA2A-209ENST00000494255 XCR1P46094 333 aa11.8□□□□□ -0.52
TRA2A-209ENST00000494255 NEK2P51955 445 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms