RNA–Protein interactions for RNA: ENST00000490432.1

TAF1B-208, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit B, human

TSL 3

Gene TAF1B, Length 620 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1B-208	ENST00000490432	TBC1D19	Q8N5T2	526 aa		11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	PPP4R1	Q8TF05	950 aa		11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	TSLP	Q969D9	159 aa		11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	MRRF	Q96E11	262 aa	Known RBP	11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	PEX11G	Q96HA9	241 aa		11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	BARD1	Q99728	777 aa	Known RBP	11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	EFCAB11	Q9BUY7	163 aa		11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	RBCK1	Q9BYM8	510 aa		11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	RIC8B	Q9NVN3	520 aa		11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	ZNF358	Q9NW07	568 aa		11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	FETUB	Q9UGM5	382 aa		11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	TSC22D4	Q9Y3Q8	395 aa		11.68	□□□□□ -0.54
TAF1B-208	ENST00000490432	NSG1	A0A0A6YYJ2	146 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	MAGEB17	A8MXT2	336 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	E2F3	O00716	465 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	CCNT2	O60583	730 aa	Known RBP	11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	SCEL	O95171	688 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	ALPP	P05187	535 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	SERPINA7	P05543	415 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	FH	P07954	510 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	RHOXF2B	P0C7M4	288 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	CNTF	P26441	200 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	TYK2	P29597	1187 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	ALDH18A1	P54886	795 aa	Known RBP	11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	MLLT10	P55197	1068 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	RAB8A	P61006	207 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	CHIT1	Q13231	466 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	RUNX2	Q13950	521 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	RBBP5	Q15291	538 aa	Known RBP	11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	UAP1	Q16222	522 aa	Predicted RBP	11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	PRR30	Q53SZ7	412 aa	Predicted RBP	11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	GRHL2	Q6ISB3	625 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	METTL2B	Q6P1Q9	378 aa	Known RBP	11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	TIFAB	Q6ZNK6	161 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	QSOX2	Q6ZRP7	698 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	RIPOR1	Q6ZS17	1223 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	UBE3D	Q7Z6J8	389 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	CUZD1	Q86UP6	607 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	SCUBE1	Q8IWY4	988 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	PARP9	Q8IXQ6	854 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	KRT78	Q8N1N4	520 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	OR2L5	Q8NG80	312 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	ZNF473	Q8WTR7	871 aa	Known RBP	11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	TBC1D20	Q96BZ9	403 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	THOC3	Q96J01	351 aa	Known RBP	11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	VPS50	Q96JG6	964 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	RHOXF2	Q9BQY4	288 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	TUBB6	Q9BUF5	446 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	MS4A8	Q9BY19	250 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	PCDHGA10	Q9Y5H3	936 aa		11.67	□□□□□ -0.54
TAF1B-208	ENST00000490432	IGHV3-20	A0A0C4DH32	117 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	SYCE1L	A8MT33	242 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	TRIM49D1	C9J1S8	452 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	TGFBR3L	H3BV60	316 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	CLGN	O14967	610 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	KLHL41	O60662	606 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	ITGAM	P11215	1152 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	COL6A2	P12110	1019 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	STXBP1	P61764	594 aa	Known RBP	11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	MFAP5	Q13361	173 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	IGFBP7	Q16270	282 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	XKR6	Q5GH73	641 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	PLAG1	Q6DJT9	500 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	H3F3C	Q6NXT2	135 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	ABHD17C	Q6PCB6	329 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	ZNF793	Q6ZN11	406 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	KBTBD2	Q8IY47	623 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	SNX31	Q8N9S9	440 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	L3MBTL4	Q8NA19	623 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	TMEM52	Q8NDY8	209 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	UHMK1	Q8TAS1	419 aa	Known RBP	11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	BRIX1	Q8TDN6	353 aa	Known RBP	11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	NPAS2	Q99743	824 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	YIPF2	Q9BWQ6	316 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	NPL	Q9BXD5	320 aa	Predicted RBP	11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	PRDM7	Q9NQW5	492 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	XPR1	Q9UBH6	696 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	OPTC	Q9UBM4	332 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	G3BP2	Q9UN86	482 aa	Known RBP	11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	PLAA	Q9Y263	795 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	B3GNT3	Q9Y2A9	372 aa		11.66	□□□□□ -0.54
TAF1B-208	ENST00000490432	EXOC1L	A0A1B0GW35	172 aa		11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	TCRBV16S1A1N1	A0A5B0	115 aa		11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	URAD	A6NGE7	173 aa		11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	STX16-NPEPL1	H3BU86	382 aa		11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	STX16	O14662	325 aa		11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	ERI3	O43414	337 aa	Known RBP	11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	CDC123	O75794	336 aa	Predicted RBP	11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	KRT38	O76015	456 aa		11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	SIX3	O95343	332 aa	Predicted RBP	11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	S100B	P04271	92 aa	Predicted RBP	11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	SERPIND1	P05546	499 aa		11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	RPS17	P08708	135 aa	Known RBP	11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	HNF4A	P41235	474 aa		11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	MSH2	P43246	934 aa		11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	HNRNPF	P52597	415 aa	Known RBP	11.65	□□□□□ -0.54
TAF1B-208	ENST00000490432	SKP1	P63208	163 aa		11.65	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms