RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 MS4A6EQ96DS6 147 aa17.08■□□□□ 0.32
COL9A3-214ENST00000490398 CAPS2Q9BXY5 557 aa17.08■□□□□ 0.32
COL9A3-214ENST00000490398 RHBGQ9H310 441 aa17.08■□□□□ 0.32
COL9A3-214ENST00000490398 EHD1Q9H4M9 534 aa17.08■□□□□ 0.32
COL9A3-214ENST00000490398 L2HGDHQ9H9P8 463 aa17.08■□□□□ 0.32
COL9A3-214ENST00000490398 TTLL8A6PVC2 850 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 KLK8O60259 260 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 B4GALT2O60909 372 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 FHP07954 510 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 ITGAMP11215 1152 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 BTN3A2P78410 334 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 BTG2P78543 158 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 IRF8Q02556 426 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 KCNC4Q03721 635 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 SETDB1Q15047 1291 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 PFKFB4Q16877 469 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 FAM219BQ5XKK7 198 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 B3GNTL1Q67FW5 361 aaPredicted RBP17.07■□□□□ 0.32
COL9A3-214ENST00000490398 IGFL2Q6UWQ7 119 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 CPEB2Q7Z5Q1 589 aaKnown RBP17.07■□□□□ 0.32
COL9A3-214ENST00000490398 CUZD1Q86UP6 607 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 KRT78Q8N1N4 520 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 SIRT6Q8N6T7 355 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 TEX9Q8N6V9 391 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 PNPLA2Q96AD5 504 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 TBC1D20Q96BZ9 403 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 C19orf60Q96EN9 201 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 PTCD3Q96EY7 689 aaKnown RBP17.07■□□□□ 0.32
COL9A3-214ENST00000490398 QRFPRQ96P65 431 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 F2RL3Q96RI0 385 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 PTGFRNQ9P2B2 879 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 CPSF2Q9P2I0 782 aaKnown RBP17.07■□□□□ 0.32
COL9A3-214ENST00000490398 OPTCQ9UBM4 332 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 ZNF180Q9UJW8 692 aa17.07■□□□□ 0.32
COL9A3-214ENST00000490398 DOCK10Q96BY6 2186 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 ERI3O43414 337 aaKnown RBP17.06■□□□□ 0.32
COL9A3-214ENST00000490398 SH3BGRLO75368 114 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 CLEC3AO75596 197 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 ALPPP05187 535 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 SERPINA7P05543 415 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 ABHD2P08910 425 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 SBK3P0C264 359 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 GFAPP14136 432 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 SOX11P35716 441 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 CASP2P42575 452 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 SERPINB9P50453 376 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 PLA2G16P53816 162 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 TBCCQ15814 346 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 ADPRMQ3LIE5 342 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 AGAP7PQ5VUJ5 663 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 Q6ZS92 163 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 CCDC91Q7Z6B0 441 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 UBE3DQ7Z6J8 389 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 TMEM52Q8NDY8 209 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 PLPP5Q8NEB5 264 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 CATSPER1Q8NEC5 780 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 CPT1CQ8TCG5 803 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 METTL21AQ8WXB1 218 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 AGAP4Q96P64 663 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 EFCAB11Q9BUY7 163 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 RIC8BQ9NVN3 520 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 PLA2G3Q9NZ20 509 aa17.06■□□□□ 0.32
COL9A3-214ENST00000490398 EXOC1LA0A1B0GW35 172 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 F10P00742 488 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 ST13P50502 369 aaKnown RBP17.05■□□□□ 0.32
COL9A3-214ENST00000490398 HNRNPFP52597 415 aaKnown RBP17.05■□□□□ 0.32
COL9A3-214ENST00000490398 SLC29A2Q14542 456 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 NAA30Q147X3 362 aaPredicted RBP17.05■□□□□ 0.32
COL9A3-214ENST00000490398 ABRAXAS2Q15018 415 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 INPP5JQ15735 1006 aaPredicted RBP17.05■□□□□ 0.32
COL9A3-214ENST00000490398 SFT2D3Q587I9 215 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 TEX35Q5T0J7 233 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 ABHD17CQ6PCB6 329 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 TRMT10CQ7L0Y3 403 aaKnown RBP17.05■□□□□ 0.32
COL9A3-214ENST00000490398 HPS6Q86YV9 775 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 PTGR2Q8N8N7 351 aaPredicted RBP17.05■□□□□ 0.32
COL9A3-214ENST00000490398 ZNF473Q8WTR7 871 aaKnown RBP17.05■□□□□ 0.32
COL9A3-214ENST00000490398 GAL3ST3Q96A11 431 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 VPS50Q96JG6 964 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 OR1F2PQ96R84 312 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 SLAMF7Q9NQ25 335 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 NECTIN3Q9NQS3 549 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 XPR1Q9UBH6 696 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 B3GNT3Q9Y2A9 372 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 NTNG1Q9Y2I2 539 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 IKBKGQ9Y6K9 419 aa17.05■□□□□ 0.32
COL9A3-214ENST00000490398 ANKDD1BA6NHY2 528 aa17.04■□□□□ 0.32
COL9A3-214ENST00000490398 SYCE1LA8MT33 242 aa17.04■□□□□ 0.32
COL9A3-214ENST00000490398 MAGEB17A8MXT2 336 aa17.04■□□□□ 0.32
COL9A3-214ENST00000490398 FOXO6A8MYZ6 492 aa17.04■□□□□ 0.32
COL9A3-214ENST00000490398 TGFBR3LH3BV60 316 aa17.04■□□□□ 0.32
COL9A3-214ENST00000490398 RTCAO00442 366 aaKnown RBP17.04■□□□□ 0.32
COL9A3-214ENST00000490398 KRT38O76015 456 aa17.04■□□□□ 0.32
COL9A3-214ENST00000490398 MAOAP21397 527 aa17.04■□□□□ 0.32
COL9A3-214ENST00000490398 CERS1P27544 350 aa17.04■□□□□ 0.32
COL9A3-214ENST00000490398 UQCRFS1P47985 274 aa17.04■□□□□ 0.32
COL9A3-214ENST00000490398 ALDH18A1P54886 795 aaKnown RBP17.04■□□□□ 0.32
COL9A3-214ENST00000490398 STXBP1P61764 594 aaKnown RBP17.04■□□□□ 0.32
COL9A3-214ENST00000490398 PCDH1Q08174 1060 aa17.04■□□□□ 0.32
COL9A3-214ENST00000490398 NSDHLQ15738 373 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms