RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 KCNH6Q9H252 994 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 SMOC1Q9H4F8 434 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 IL1RL2Q9HB29 575 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 SPAG4Q9NPE6 437 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 MIEF1Q9NQG6 463 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 ATAD3AQ9NVI7 634 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 KLHL3Q9UH77 587 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 PILRAQ9UKJ1 303 aa9.55□□□□□ -0.88
USP11-211ENST00000489111 WBP11Q9Y2W2 641 aaKnown RBP9.55□□□□□ -0.88
USP11-211ENST00000489111 C15orf38-AP3S2A0A0A6YYH1 394 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 A0A0G2JN53 185 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 ASPDHA6ND91 283 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 H0YGG7 62 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 TXNDC9O14530 226 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 ZSCAN9O15535 394 aaPredicted RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 KCNH1O95259 989 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 ZBTB11O95625 1053 aaPredicted RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 NPPAP01160 153 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 IL3P08700 152 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 ZNF888P0CJ79 500 aaPredicted RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 MYF5P13349 255 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 PNLIPP16233 465 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 TPP2P29144 1249 aaPredicted RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 TSFMP43897 325 aaKnown RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 DUSP3P51452 185 aaPredicted RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 VSX2P58304 361 aaPredicted RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 ARF3P61204 181 aaPredicted RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 TRA2BP62995 288 aaKnown RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 DAB2P98082 770 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 KLC1Q07866 573 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 C2orf80Q0P641 193 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 SLC9A5Q14940 896 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 HEPACAMQ14CZ8 416 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 SUZ12Q15022 739 aaKnown RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 TLR1Q15399 786 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 DEFB110Q30KQ9 67 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 ANXA8L1Q5VT79 327 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 FRMPD2BQ6IN97 320 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 TCEAL6Q6IPX3 200 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 FBXO42Q6P3S6 717 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 GUSBP11Q6P575 273 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 ABHD17CQ6PCB6 329 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 SLC2A7Q6PXP3 512 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 RIPOR1Q6ZS17 1223 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 UBE3DQ7Z6J8 389 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 ARPINQ7Z6K5 226 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 GPR180Q86V85 440 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 SCUBE1Q8IWY4 988 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 DPP10Q8N608 796 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 OR7A2PQ8NGA2 310 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 DNAJB8Q8NHS0 232 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 TCEAL3Q969E4 200 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 UTP4Q969X6 686 aaKnown RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 ITCHQ96J02 903 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 TMEM74Q96NL1 305 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 TEFMQ96QE5 360 aaKnown RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 HOPXQ9BPY8 73 aaPredicted RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 FAIM2Q9BWQ8 316 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 KLHL31Q9H511 634 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 REEP4Q9H6H4 257 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 SYNDIG1Q9H7V2 258 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 DDX31Q9H8H2 851 aaKnown RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 PDE7BQ9NP56 450 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 C11orf16Q9NQ32 467 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 SLC52A3Q9NQ40 469 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 IRAK4Q9NWZ3 460 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 FAM120CQ9NX05 1096 aaKnown RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 LYARQ9NX58 379 aaKnown RBP9.54□□□□□ -0.88
USP11-211ENST00000489111 ADA2Q9NZK5 511 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 SPAG17Q6Q759 2223 aa9.54□□□□□ -0.88
USP11-211ENST00000489111 LOC105369274A0A096LPK9 316 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 A0A0A6YYD5 115 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 LOC102723532A0A0G2JNH3 316 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 P2RX6O15547 441 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 KIF1CO43896 1103 aaKnown RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 PRAMEF10O60809 474 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 PDE5AO76074 875 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 FAM58BPP0C7Q3 252 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 HIST1H1TP22492 207 aaPredicted RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 ATP5A1P25705 553 aaKnown RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 CERS1P27544 350 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 GRK6P43250 576 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 ALDH9A1P49189 494 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 SLC7A2P52569 658 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 MTTPP55157 894 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 RAB8AP61006 207 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 SKP1P63208 163 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 BTN3A2P78410 334 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 LRRC74AQ0VAA2 488 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 HYAL2Q12891 473 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 CAPRIN1Q14444 709 aaKnown RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 UGT8Q16880 541 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 PAGE3Q5JUK9 113 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 SAMD4BQ5PRF9 694 aaKnown RBP9.53□□□□□ -0.88
USP11-211ENST00000489111 SNAP47Q5SQN1 464 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 MANEAQ5SRI9 462 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 OR4F3Q6IEY1 312 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 FAM71E1Q6IPT2 247 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 ANKRD26P1Q6NSI1 321 aa9.53□□□□□ -0.88
USP11-211ENST00000489111 WDR74Q6RFH5 385 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms