RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 TSPEARQ8WU66 669 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 MYLIPQ8WY64 445 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 SLC38A4Q969I6 547 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 TP53INP1Q96A56 240 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 COL21A1Q96P44 957 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 IL17FQ96PD4 163 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 TRPV5Q9NQA5 729 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 AIG1Q9NVV5 245 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 PCTPQ9UKL6 214 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 IGLON5A6NGN9 336 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 MUSKO15146 869 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 CREG1O75629 220 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 UBXN7O94888 489 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 DIRAS1O95057 198 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 NR2F6P10588 404 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 BCKDHAP12694 445 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 C6P13671 934 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 CSNK2A2P19784 350 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 AZGP1P25311 298 aaKnown RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 HOXD9P28356 352 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 MLLT3P42568 568 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 SLC15A1P46059 708 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 ARF5P84085 180 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 ELOCQ15369 112 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 SNAPC1Q16533 368 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 HTR3DQ70Z44 454 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 MCEMP1Q8IX19 187 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 GPR26Q8NDV2 337 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 GPR150Q8NGU9 434 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 GAL3ST4Q96RP7 486 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 HCN3Q9P1Z3 774 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 MKLN1Q9UL63 735 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 CNTRLQ7Z7A1 2325 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 DFNA5O60443 496 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 CCNB2O95067 398 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 SRPRAP08240 638 aaKnown RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 GSTT2P0CG29 244 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 GSTT2BP0CG30 244 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 MPC1LP0DKB6 136 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 OXTRP30559 389 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 TIGD6Q17RP2 521 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 C6orf141Q5SZD1 244 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 CHERPQ8IWX8 916 aaKnown RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 L3HYPDHQ96EM0 354 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 SLC29A1Q99808 456 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 MMP27Q9H306 513 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 ARMC1Q9NVT9 282 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 FAM120CQ9NX05 1096 aaKnown RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 B3GNT3Q9Y2A9 372 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 SAGP10523 405 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 ERVPABLB-1P60509 514 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 KCNC3Q14003 757 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 GANABQ14697 944 aaKnown RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 SYT16Q17RD7 645 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 RTL10Q7L3V2 364 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 GALNT12Q8IXK2 581 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 ABHD11Q8NFV4 315 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 FOXJ1Q92949 421 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 OSBPL10Q9BXB5 764 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 IRF2BPLQ9H1B7 796 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 GSTO2Q9H4Y5 243 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 NEK6Q9HC98 313 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 KRBA1A5PL33 1030 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 PRORSD1PA6NEY8 169 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 GRXCR1A8MXD5 290 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 INMTO95050 263 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 OXSR1O95747 527 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 ATXN1LP0C7T5 689 aaKnown RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 PRG2P13727 222 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 CD247P20963 164 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 MPIP34949 423 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 ADRA1AP35348 466 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 ARCN1P48444 511 aaKnown RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 PGFP49763 221 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 ZNF140P52738 457 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 DSTNP60981 165 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 DOC2AQ14183 400 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 PON2Q15165 354 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 C5orf22Q49AR2 442 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 CYP4V2Q6ZWL3 525 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 IKBIPQ70UQ0 350 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 NPAS3Q8IXF0 933 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 SLC15A3Q8IY34 581 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 ASCC1Q8N9N2 400 aaKnown RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 DIRAS2Q96HU8 199 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 NPLQ9BXD5 320 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-228ENST00000486227 ITPAQ9BY32 194 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 AMBNQ9NP70 447 aa10.63□□□□□ -0.71
HDAC6-228ENST00000486227 NME6O75414 186 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-228ENST00000486227 PIM1P11309 404 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-228ENST00000486227 GABRB3P28472 473 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 GNG2P59768 71 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 PLEKHG7Q6ZR37 379 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 PEX5LQ8IYB4 626 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 KCT2Q8NC54 265 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 TFAP2CQ92754 450 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 KAT2AQ92830 837 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 HLA-CQ95604 372 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 TPK1Q9H3S4 243 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms