RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 CA13Q8N1Q1 262 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 PWWP2AQ96N64 755 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 MCMBPQ9BTE3 642 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 NPLQ9BXD5 320 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-206ENST00000484733 UNKQ9C0B0 810 aaKnown RBP10.74□□□□□ -0.69
SCFD1-206ENST00000484733 PITHD1Q9GZP4 211 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-206ENST00000484733 LRFN1Q9P244 771 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 SLC22A14Q9Y267 594 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 CDC7O00311 574 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 NME2P1O60361 137 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 H2AFYO75367 372 aaKnown RBP10.73□□□□□ -0.69
SCFD1-206ENST00000484733 B3GALT4O96024 378 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 C1GALT1C1LP0DN25 315 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 NME2P22392 152 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 GRNP28799 593 aaKnown RBP10.73□□□□□ -0.69
SCFD1-206ENST00000484733 HLCSP50747 726 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 SMSP52788 366 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 ITGA8P53708 1063 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 OLR1P78380 273 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 BTG2P78543 158 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 ADORA2A-AS1P86434 159 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 DR1Q01658 176 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 TERF2Q15554 542 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 GALNTL5Q7Z4T8 443 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 POGLUT1Q8NBL1 392 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 ARMC2Q8NEN0 867 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 TTLQ8NG68 377 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 ADAMTS18Q8TE60 1221 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 MAGED4Q96JG8 741 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 TSNARE1Q96NA8 513 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 CAPS2Q9BXY5 557 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 AICDAQ9GZX7 198 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 KLHL31Q9H511 634 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 KLHL1Q9NR64 748 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 ZFATQ9P243 1243 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 PPIEQ9UNP9 301 aaKnown RBP10.73□□□□□ -0.69
SCFD1-206ENST00000484733 SVILO95425 2214 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 FAM95CA0A1B0GW59 222 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 SYNDIG1LA6NDD5 238 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 ASNA1O43681 348 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 SEC31AO94979 1220 aaKnown RBP10.73□□□□□ -0.69
SCFD1-206ENST00000484733 HTR1EP28566 365 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 SLC6A12P48065 614 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 STXBP1P61764 594 aaKnown RBP10.73□□□□□ -0.69
SCFD1-206ENST00000484733 OC90Q02509 493 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-206ENST00000484733 SRSF11Q05519 484 aaKnown RBP10.73□□□□□ -0.69
SCFD1-206ENST00000484733 RBBP5Q15291 538 aaKnown RBP10.73□□□□□ -0.69
SCFD1-206ENST00000484733 TOR1AIP1Q5JTV8 583 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 CDKL4Q5MAI5 379 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 SLCO4C1Q6ZQN7 724 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 TMPRSS11BQ86T26 416 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 ADAMTSL2Q86TH1 951 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 ZNF227Q86WZ6 799 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 CREG2Q8IUH2 290 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 MCEMP1Q8IX19 187 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 SRRM1Q8IYB3 904 aaKnown RBP10.73□□□□□ -0.69
SCFD1-206ENST00000484733 GHDCQ8N2G8 530 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 KIF2BQ8N4N8 673 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 PHF10Q8WUB8 498 aaKnown RBP10.73□□□□□ -0.69
SCFD1-206ENST00000484733 GAL3ST3Q96A11 431 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 NECTIN3Q9NQS3 549 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 ANKRD10Q9NXR5 420 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 GPRC5BQ9NZH0 403 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 PSAT1Q9Y617 370 aa10.73□□□□□ -0.69
SCFD1-206ENST00000484733 NCOA6Q14686 2063 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-206ENST00000484733 ITPR2Q14571 2701 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 CTAGE15A4D2H0 777 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 NPEPPSL1A6NEC2 478 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 CCDC188H7C350 402 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 PSMD12O00232 456 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-206ENST00000484733 TP73O15350 636 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 WISP3O95389 354 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-206ENST00000484733 CYB561P49447 251 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 TAS2R39P59534 338 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 RAB8AP61006 207 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 HP1BP3Q5SSJ5 553 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-206ENST00000484733 ZNF468Q5VIY5 522 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-206ENST00000484733 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-206ENST00000484733 CTAGE6Q86UF2 777 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 SCUBE1Q8IWY4 988 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 RHOJQ9H4E5 214 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 CTNNAL1Q9UBT7 734 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 MEMO1Q9Y316 297 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 MYO7BQ6PIF6 2116 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 C4orf51C9J302 202 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 NPIPA5E9PKD4 350 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 FAM227AF5H4B4 570 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 FCHO1O14526 889 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 SLC25A12O75746 678 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 ESRRAP11474 423 aaPredicted RBP10.72□□□□□ -0.69
SCFD1-206ENST00000484733 GNAZP19086 355 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 ANKMY2Q8IV38 441 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 CHERPQ8IWX8 916 aaKnown RBP10.72□□□□□ -0.69
SCFD1-206ENST00000484733 KLHL7Q8IXQ5 586 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 CYP4X1Q8N118 509 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 TCAIMQ8N3R3 496 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 FBXO36Q8NEA4 188 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 RHBDF1Q96CC6 855 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 VPS39Q96JC1 886 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 QRFPRQ96P65 431 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms