RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 GPR143P51810 404 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 GPR85P60893 370 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 ACTN3Q08043 901 aaPredicted RBP8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 KRTAP21-3Q3LHN1 58 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 HSP90AA5PQ58FG0 334 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 UGT3A1Q6NUS8 523 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 CASC4Q6P4E1 433 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 C4orf22Q6V702 233 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 QSOX2Q6ZRP7 698 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 CEP128Q6ZU80 1094 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 GSTA5Q7RTV2 222 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 CCDC71Q8IV32 467 aaPredicted RBP8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 NAT8LQ8N9F0 302 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 ZFP62Q8NB50 900 aaPredicted RBP8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 SPC24Q8NBT2 197 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 C2CD4AQ8NCU7 369 aaPredicted RBP8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 C16orf52Q8NHV5 167 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 NT5CQ8TCD5 201 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 NEIL2Q969S2 332 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 PTCHD1Q96NR3 888 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 WDR83Q9BRX9 315 aaKnown RBP8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 SLC6A16Q9GZN6 736 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 LIN28AQ9H9Z2 209 aaKnown RBP8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 PARVBQ9HBI1 364 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 IARS2Q9NSE4 1012 aaKnown RBP8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 RNF6Q9Y252 685 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 ZKSCAN5Q9Y2L8 839 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 LIPGQ9Y5X9 500 aa8.68□□□□□ -1.02
GTF3C2-210ENST00000480989 FLNAP21333 2647 aaKnown RBP8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 TRBC2A0A5B9 178 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 SDR42E2A6NKP2 422 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 FAM90A27PA6NNH2 459 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 AP3B1O00203 1094 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 EIF3FO00303 357 aaPredicted RBP8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 OR1F1O43749 312 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 NRDCO43847 1150 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 CEP104O60308 925 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 KRT14P02533 472 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 TPOP07202 933 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 SLC35G6P0C7Q6 338 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 MYBL2P10244 700 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 MLNP12872 115 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 HOXB4P17483 251 aaPredicted RBP8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 PAMP19021 973 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 CAPN3P20807 821 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 IL10P22301 178 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 MSX1P28360 303 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 PTGS2P35354 604 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 CYB561P49447 251 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 HLCSP50747 726 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 NUP107P57740 925 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 RAB8AP61006 207 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 REEP5Q00765 189 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 HERC3Q15034 1050 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 MSS51Q4VC12 460 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 ARHGAP21Q5T5U3 1957 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 ARMC3Q5W041 872 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 IGDCC3Q8IVU1 814 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 SCUBE1Q8IWY4 988 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 ANKHD1Q8IWZ3 2542 aaKnown RBP8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 DMRTC2Q8IXT2 367 aaPredicted RBP8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 CYP4X1Q8N118 509 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 CA13Q8N1Q1 262 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 MCUQ8NE86 351 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 MCOLN3Q8TDD5 553 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 CREB3L4Q8TEY5 395 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 CA5BP1Q8WTZ4 195 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 LINGO1Q96FE5 620 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 SNF8Q96H20 258 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 SEC16BQ96JE7 1060 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 TSNARE1Q96NA8 513 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 TSGA10Q9BZW7 698 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 LIME1Q9H400 295 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 KIAA1549Q9HCM3 1950 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 IGSF5Q9NSI5 407 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 C20orf96Q9NUD7 363 aaPredicted RBP8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 ZFATQ9P243 1243 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 VPS9D1Q9Y2B5 631 aa8.67□□□□□ -1.02
GTF3C2-210ENST00000480989 A0A0G2JN53 185 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 TRBV11-1A0A0K0K1C0 115 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 PRRG2O14669 202 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 TFECO14948 347 aaPredicted RBP8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 PFDN6O15212 129 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 SLC16A5O15375 505 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 PEX1O43933 1283 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 CDC40O60508 579 aaKnown RBP eCLIP8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 PRMT3O60678 531 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 PRAMEF4O60810 478 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 PDE9AO76083 593 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 AHSGP02765 367 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 C8GP07360 202 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 HNF4AP41235 474 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 CCR8P51685 355 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 DLX5P56178 289 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 TAS2R50P59544 299 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 SP140Q13342 867 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 PWP1Q13610 501 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 THOC5Q13769 683 aaKnown RBP8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 RUNX2Q13950 521 aa8.66□□□□□ -1.02
GTF3C2-210ENST00000480989 CRYMQ14894 314 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms