RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CENPKQ9BS16 269 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 B3GNT4Q9C0J1 378 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 AICDAQ9GZX7 198 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 ILKAPQ9H0C8 392 aaPredicted RBP14.57□□□□□ -0.08
SEC13-215ENST00000477547 OR51B5Q9H339 312 aa14.57□□□□□ -0.08
SEC13-215ENST00000477547 TENM4Q6N022 2769 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 LRIT2A6NDA9 550 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 FOXE1O00358 373 aaPredicted RBP14.56□□□□□ -0.08
SEC13-215ENST00000477547 ULK1O75385 1050 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 DLGAP3O95886 979 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 TBX6O95947 436 aaPredicted RBP14.56□□□□□ -0.08
SEC13-215ENST00000477547 TGFB1P01137 390 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 HSD3B1P14060 373 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 HSD3B2P26439 372 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 SERPINB3P29508 390 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 RAP1GDS1P52306 607 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 RAB8AP61006 207 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 SNRPNP63162 240 aaKnown RBP14.56□□□□□ -0.08
SEC13-215ENST00000477547 ABRAXAS2Q15018 415 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 FAM214AQ32MH5 1076 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 ADPRMQ3LIE5 342 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 MANEAQ5SRI9 462 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 C1orf189Q5VU69 101 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 KHDRBS2Q5VWX1 349 aaKnown RBP14.56□□□□□ -0.08
SEC13-215ENST00000477547 TRIM40Q6P9F5 258 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 SCIMPQ6UWF3 145 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 DDIASQ8IXT1 998 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 CLYBLQ8N0X4 340 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 DTWD1Q8N5C7 304 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 PROKR1Q8TCW9 393 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 MS4A6EQ96DS6 147 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 F2RL3Q96RI0 385 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 SERPINI1Q99574 410 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 C17orf62Q9BQA9 187 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 REXO4Q9GZR2 422 aaKnown RBP14.56□□□□□ -0.08
SEC13-215ENST00000477547 KLHL31Q9H511 634 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 COPS7BQ9H9Q2 264 aaPredicted RBP14.56□□□□□ -0.08
SEC13-215ENST00000477547 BRF2Q9HAW0 419 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 ANKHQ9HCJ1 492 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 ZDHHC2Q9UIJ5 367 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 HAO1Q9UJM8 370 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 PPT2Q9UMR5 302 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 SLC12A4Q9UP95 1085 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.56□□□□□ -0.08
SEC13-215ENST00000477547 TRAF6Q9Y4K3 522 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 PTGDR2Q9Y5Y4 395 aa14.56□□□□□ -0.08
SEC13-215ENST00000477547 A0A0A6YYC8 382 aaPredicted RBP14.55□□□□□ -0.08
SEC13-215ENST00000477547 A0A0G2JN53 185 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 TEX51A0A1B0GUA7 166 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 I3L1I5 382 aaPredicted RBP14.55□□□□□ -0.08
SEC13-215ENST00000477547 SAP18O00422 153 aaKnown RBP14.55□□□□□ -0.08
SEC13-215ENST00000477547 ETHE1O95571 254 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 FGF4P08620 206 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 ATXN8OSP0DMR3 200 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 ALOX12P18054 663 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 CD82P27701 267 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 ITPKBP27987 946 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 RORAP35398 523 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 GUCY1A3Q02108 690 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 ZNF33BQ06732 778 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 TGM3Q08188 693 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 HERC3Q15034 1050 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 PDCD2Q16342 344 aaPredicted RBP14.55□□□□□ -0.08
SEC13-215ENST00000477547 IMPG1Q17R60 797 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 DEFB134Q4QY38 66 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 TMEM35AQ53FP2 167 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 RGS9BPQ6ZS82 235 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 FAM47EQ6ZV65 393 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 CHSY3Q70JA7 882 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 PRSS41Q7RTY9 318 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 SLC38A9Q8NBW4 561 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 GALNT6Q8NCL4 622 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 OR2L5Q8NG80 312 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 UTP15Q8TED0 518 aaKnown RBP14.55□□□□□ -0.08
SEC13-215ENST00000477547 MVB12AQ96EY5 273 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 C7orf26Q96N11 449 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 ACPTQ9BZG2 426 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 SLCO1B3Q9NPD5 702 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 MARCOQ9UEW3 520 aaPredicted RBP14.55□□□□□ -0.08
SEC13-215ENST00000477547 TMEM184BQ9Y519 407 aaPredicted RBP14.55□□□□□ -0.08
SEC13-215ENST00000477547 DNAJC15Q9Y5T4 150 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 SLC22A7Q9Y694 548 aa14.55□□□□□ -0.08
SEC13-215ENST00000477547 ZNF860A6NHJ4 632 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 STMND1H3BQB6 276 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 PIP5K1BO14986 540 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 KLHL18O94889 574 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 SEMA3DO95025 777 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 ALAS2P22557 587 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 PTX3P26022 381 aaPredicted RBP14.54□□□□□ -0.08
SEC13-215ENST00000477547 SSR2P43308 183 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 RPL14P50914 215 aaKnown RBP14.54□□□□□ -0.08
SEC13-215ENST00000477547 PLA2G16P53816 162 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 SKP1P63208 163 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 HMGCS1Q01581 520 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 CUL3Q13618 768 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 FAM53BQ14153 422 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 SLC9A5Q14940 896 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 TBC1D25Q3MII6 688 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 ARHGAP40Q5TG30 622 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 ZFAND4Q86XD8 727 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms