RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 PEAR1Q5VY43 1037 aaPredicted RBP13.77□□□□□ -0.21
COL4A6-206ENST00000477085 OR4C11Q6IEV9 310 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 ABHD17CQ6PCB6 329 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 CAMKMTQ7Z624 323 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 GPR180Q86V85 440 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 C11orf74Q86VG3 221 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 TRPV3Q8NET8 790 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 CGREF1Q99674 301 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 REEP4Q9H6H4 257 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 DDX31Q9H8H2 851 aaKnown RBP13.77□□□□□ -0.21
COL4A6-206ENST00000477085 IL21RQ9HBE5 538 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 FAM60AQ9NP50 221 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 ATP6V1HQ9UI12 483 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 USP22Q9UPT9 525 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 PCDHGA2Q9Y5H1 932 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 CSNK1G3Q9Y6M4 447 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 TP53BP1Q12888 1972 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-206ENST00000477085 A0A0A6YYD5 115 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 CAPN5O15484 640 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-206ENST00000477085 KRT36O76013 467 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 KCNH1O95259 989 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 GSNP06396 782 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 CTSBP07858 339 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 ST6GAL1P15907 406 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 GSTM2P28161 218 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 ATXN3P54252 364 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-206ENST00000477085 MTPNP58546 118 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 SIM2Q14190 667 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-206ENST00000477085 TMEM35AQ53FP2 167 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 TOR1AIP1Q5JTV8 583 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 C6orf10Q5SRN2 563 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 C6orf132Q5T0Z8 1188 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 LRIF1Q5T3J3 769 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 PRMT9Q6P2P2 845 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 DNAJC14Q6Y2X3 702 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-206ENST00000477085 SLC35F3Q8IY50 421 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 CLECL1Q8IZS7 167 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 TMEM132CQ8N3T6 1108 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 SLC38A3Q99624 504 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 KCNH6Q9H252 994 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 PCDHB14Q9Y5E9 798 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 TMEM131Q92545 1883 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 LILRA5A6NI73 299 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 PATE3B3GLJ2 98 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 DNAJA2O60884 412 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 PROS1P07225 676 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 SP9P0CG40 484 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 RAB8AP61006 207 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 RUNDC3AQ59EK9 446 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 SAMD4BQ5PRF9 694 aaKnown RBP13.76□□□□□ -0.21
COL4A6-206ENST00000477085 CPTPQ5TA50 214 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 NKAIN2Q5VXU1 208 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 ASPGQ86U10 573 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 PACS2Q86VP3 889 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 GATAD2AQ86YP4 633 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 C10orf111Q8N326 155 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 HIPK4Q8NE63 616 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 OR2L5Q8NG80 312 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 NT5CQ8TCD5 201 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 ANKRD27Q96NW4 1050 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 TRAPPC9Q96Q05 1148 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 DUSP26Q9BV47 211 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 SEMA6CQ9H3T2 930 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 TEX10Q9NXF1 929 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-206ENST00000477085 ANKMY1Q9P2S6 941 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 LRIT1Q9P2V4 623 aa13.76□□□□□ -0.21
COL4A6-206ENST00000477085 A0A096LPI6 279 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 A0A1B0GTQ1 180 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 WASHC1A8K0Z3 465 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 H0YGG7 62 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 ERI3O43414 337 aaKnown RBP13.75□□□□□ -0.21
COL4A6-206ENST00000477085 KIF1CO43896 1103 aaKnown RBP13.75□□□□□ -0.21
COL4A6-206ENST00000477085 CAPZBP47756 277 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 MAPK12P53778 367 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 ARF3P61204 181 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-206ENST00000477085 RELAQ04206 551 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 TRIM25Q14258 630 aaKnown RBP13.75□□□□□ -0.21
COL4A6-206ENST00000477085 DPY19L1Q2PZI1 675 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 HLA-BQ31612 363 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 FAM180BQ6P0A1 224 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 MSANTD1Q6ZTZ1 278 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 RNF44Q7L0R7 432 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 NUDT13Q86X67 352 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 TBC1D19Q8N5T2 526 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 AVL9Q8NBF6 648 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 ZBTB44Q8NCP5 570 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 OR8K5Q8NH50 307 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 CIDECQ96AQ7 238 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-206ENST00000477085 AURKBQ96GD4 344 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-206ENST00000477085 ITCHQ96J02 903 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-206ENST00000477085 SH3BP4Q9P0V3 963 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 SUCOQ9UBS9 1254 aaKnown RBP13.75□□□□□ -0.21
COL4A6-206ENST00000477085 ADAM29Q9UKF5 820 aa13.75□□□□□ -0.21
COL4A6-206ENST00000477085 H0Y3Z8 333 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 DNAJB6O75190 326 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 ERN1O75460 977 aaKnown RBP13.74□□□□□ -0.21
COL4A6-206ENST00000477085 BCAS2O75934 225 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-206ENST00000477085 FKBP9O95302 570 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 PSMG1O95456 288 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms