RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 TTC23Q5W5X9 447 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 OR2T5Q6IEZ7 315 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 WASH2PQ6VEQ5 465 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 ZNF852Q6ZMS4 543 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 PAGE2Q7Z2X7 111 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 TRIM69Q86WT6 500 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.38□□□□□ -0.91
USP39-214ENST00000474572 ADGRF3Q8IZF5 1079 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 CLEC4FQ8N1N0 589 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 GALNT15Q8N3T1 639 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 TRIML2Q8N7C3 387 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 C11orf65Q8NCR3 313 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 OR2T29Q8NH02 315 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 CYGBQ8WWM9 190 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 KLK6Q92876 244 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 TM4SF18Q96CE8 201 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 C7orf34Q96L11 122 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 QRFPRQ96P65 431 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 FERD3LQ96RJ6 166 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 NRTNQ99748 197 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 DPH2Q9BQC3 489 aaPredicted RBP9.38□□□□□ -0.91
USP39-214ENST00000474572 AMBRA1Q9C0C7 1298 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 TOR3AQ9H497 397 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 RAD21L1Q9H4I0 556 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 C8orf33Q9H7E9 229 aaPredicted RBP9.38□□□□□ -0.91
USP39-214ENST00000474572 LHX9Q9NQ69 397 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 C1GALT1Q9NS00 363 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 TAS2R9Q9NYW1 312 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 TAAR2Q9P1P5 351 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 SUFUQ9UMX1 484 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 ABCG2Q9UNQ0 655 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 MAGED1Q9Y5V3 778 aaPredicted RBP9.38□□□□□ -0.91
USP39-214ENST00000474572 CFAP20Q9Y6A4 193 aaKnown RBP9.38□□□□□ -0.91
USP39-214ENST00000474572 CEPT1Q9Y6K0 416 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 COMMD3-BMI1R4GMX3 469 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 A0A1W2PRB8 838 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 EME2A4GXA9 379 aaPredicted RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 CACNB4O00305 520 aaPredicted RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 SAP18O00422 153 aaKnown RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 SLC16A6O15403 523 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 NDUFS4O43181 175 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 KLF8O95600 359 aaPredicted RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 CLIC3O95833 236 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 GBAP04062 536 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 FABP3P05413 133 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 NUDT7P0C024 238 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 ARAFP10398 606 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 DDX5P17844 614 aaKnown RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 NELFEP18615 380 aaKnown RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 EFNA1P20827 205 aaPredicted RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 FPR1P21462 350 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 RPL10P27635 214 aaKnown RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 PEBP1P30086 187 aaKnown RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 GSTT1P30711 240 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 DNAJA1P31689 397 aaKnown RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 SHMT2P34897 504 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 HLCSP50747 726 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 RPS6KA3P51812 740 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 IST1P53990 364 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 SH3BGRP55822 239 aaPredicted RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 KCNJ10P78508 379 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 ABATP80404 500 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 VLDLRP98155 873 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 IL18R1Q13478 541 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 MLC1Q15049 377 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 RBBP5Q15291 538 aaKnown RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 ADPRMQ3LIE5 342 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 GCNT6Q5T4J0 391 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 IER5LQ5T953 404 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 SPESP1Q6UW49 350 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 RBM44Q6ZP01 1051 aaKnown RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 UBE3DQ7Z6J8 389 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 NUDT13Q86X67 352 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 DCP2Q8IU60 420 aaKnown RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 SLC30A8Q8IWU4 369 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 OFCC1Q8IZS5 231 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 HS3ST5Q8IZT8 346 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 NAGSQ8N159 534 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 ZNF786Q8N393 782 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 C2orf73Q8N5S3 287 aaPredicted RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 SMRP1Q8NCR6 262 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 TTLQ8NG68 377 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 OR52E1Q8NGJ3 308 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 PSMA8Q8TAA3 256 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 PNPT1Q8TCS8 783 aaKnown RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 CREB3L4Q8TEY5 395 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 FBLIM1Q8WUP2 373 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 OR5P2Q8WZ92 322 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 DNASE1L2Q92874 299 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 CIDECQ96AQ7 238 aaPredicted RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 HSH2DQ96JZ2 352 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 OR2M4Q96R27 311 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 SLC35A5Q9BS91 424 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 ACAT2Q9BWD1 397 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 SLC6A16Q9GZN6 736 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 AICDAQ9GZX7 198 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 SLC6A17Q9H1V8 727 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 SOX17Q9H6I2 414 aaPredicted RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 KIR3DX1Q9H7L2 352 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 DDX31Q9H8H2 851 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms