RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 CTAGE8P0CG41 777 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 KRT5P13647 590 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 CHN1P15882 459 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 STIP1P31948 543 aaKnown RBP6.55□□□□□ -1.36
SCAF4-205ENST00000472318 ARCN1P48444 511 aaKnown RBP6.55□□□□□ -1.36
SCAF4-205ENST00000472318 KIAA1024LP59773 190 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 RUNX1T1Q06455 604 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 KIF5AQ12840 1032 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 CUL2Q13617 745 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 RPS6KA1Q15418 735 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 ZRSR1Q15695 479 aaKnown RBP6.55□□□□□ -1.36
SCAF4-205ENST00000472318 IL17AQ16552 155 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 SEL1L3Q68CR1 1132 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 ARHGAP11AQ6P4F7 1023 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 RBPMS2Q6ZRY4 209 aaKnown RBP6.55□□□□□ -1.36
SCAF4-205ENST00000472318 PARS2Q7L3T8 475 aaKnown RBP6.55□□□□□ -1.36
SCAF4-205ENST00000472318 KCTD20Q7Z5Y7 419 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 TMEM135Q86UB9 458 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 CTAGE6Q86UF2 777 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 GAS2L3Q86XJ1 694 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 PDSS2Q86YH6 399 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 CTAGE4Q8IX94 777 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCAF4-205ENST00000472318 KDM1BQ8NB78 822 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 STARD8Q92502 1023 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 C1orf74Q96LT6 269 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 PLIN2Q99541 437 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 TBCDQ9BTW9 1192 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 SLC29A3Q9BZD2 475 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 TRIM31Q9BZY9 425 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 SIK2Q9H0K1 926 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 GPR35Q9HC97 309 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 INTS13Q9NVM9 706 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 CHCHD3Q9NX63 227 aaKnown RBP6.55□□□□□ -1.36
SCAF4-205ENST00000472318 SLC17A6Q9P2U8 582 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 FAM153AQ9UHL3 310 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 PILRAQ9UKJ1 303 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 USP22Q9UPT9 525 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 COL6A5A8TX70 2615 aa6.55□□□□□ -1.36
SCAF4-205ENST00000472318 DOCK9Q9BZ29 2069 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 ZSCAN5CA6NGD5 496 aaPredicted RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 M0QYG6 137 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 SLC33A1O00400 549 aaPredicted RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 CD3EAPO15446 510 aaKnown RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 MAGEB3O15480 346 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 RGS10O43665 173 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 PEX1O43933 1283 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 SLC43A1O75387 559 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 RBMXL2O75526 392 aaKnown RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 RASAL1O95294 804 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 SIX3O95343 332 aaPredicted RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 TPBGLP0DKB5 382 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 PIM1P11309 404 aaPredicted RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 GABRB1P18505 474 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 TCN2P20062 427 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 F8A1P23610 371 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 CPOXP36551 454 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 FOLR3P41439 243 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 PRKCIP41743 596 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 NUMBP49757 651 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 STK19P49842 368 aaPredicted RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 KHKP50053 298 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 GBX2P52951 348 aaPredicted RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 NIPAL4Q0D2K0 466 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 TRA2AQ13595 282 aaKnown RBP eCLIP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 ELAVL3Q14576 367 aaKnown RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 DPCR1Q3MIW9 517 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 FSCBQ5H9T9 825 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 PIP5KL1Q5T9C9 394 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 KRT79Q5XKE5 535 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 ZCCHC12Q6PEW1 402 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 KYAT3Q6YP21 454 aaKnown RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 SPATA19Q7Z5L4 167 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 HORMAD1Q86X24 394 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 XXYLT1Q8NBI6 393 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 SLC2A14Q8TDB8 520 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 HDAC11Q96DB2 347 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 ZDHHC12Q96GR4 267 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 NUP85Q9BW27 656 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 TLR10Q9BXR5 811 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 SPRY4Q9C004 299 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 TRIM7Q9C029 511 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 KLK15Q9H2R5 256 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 SERINC1Q9NRX5 453 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 SPASTQ9UBP0 616 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 APOBEC3BQ9UH17 382 aaKnown RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 STOML2Q9UJZ1 356 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 NFS1Q9Y697 457 aa6.54□□□□□ -1.36
SCAF4-205ENST00000472318 ANK3Q12955 4377 aaKnown RBP6.54□□□□□ -1.36
SCAF4-205ENST00000472318 GOLGA6L7A0A1B0GV03 622 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 SLC9B1P1A6NJY1 282 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 ZNF785A8K8V0 405 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 EIF3CLB5ME19 914 aaKnown RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 LRRTM2O43300 516 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 ZG16O60844 167 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 TBL1XO60907 577 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 PROP1O75360 226 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 LETM1O95202 739 aaPredicted RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 SRPRAP08240 638 aaKnown RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 CD99P14209 185 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms