RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PGAM5Q96HS1 289 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 KCNC2Q96PR1 638 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 PAPOLGQ9BWT3 736 aaKnown RBP8.28□□□□□ -1.08
CD47-204ENST00000471694 POLDIP3Q9BY77 421 aaKnown RBP8.28□□□□□ -1.08
CD47-204ENST00000471694 GPN1Q9HCN4 374 aaPredicted RBP8.28□□□□□ -1.08
CD47-204ENST00000471694 H0YJX3 145 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 AQP9O43315 295 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 PTNP21246 168 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 IL12RB1P42701 662 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 LSM3P62310 102 aaKnown RBP8.28□□□□□ -1.08
CD47-204ENST00000471694 MZT1Q08AG7 82 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 IL18Q14116 193 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 RELL1Q8IUW5 271 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 OMA1Q96E52 524 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 TMEM184CQ9NVA4 438 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 IL20RAQ9UHF4 553 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 FAM155BO75949 473 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 LCKP06239 509 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 ACSL1P33121 698 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 GLP1RP43220 463 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 GLYATQ6IB77 296 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 RBM44Q6ZP01 1051 aaKnown RBP8.28□□□□□ -1.08
CD47-204ENST00000471694 NSMAFQ92636 917 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 TOX2Q96NM4 488 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 C16orf70Q9BSU1 422 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 APOBEC3GQ9HC16 384 aaKnown RBP8.28□□□□□ -1.08
CD47-204ENST00000471694 PIGVQ9NUD9 493 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 TVP23BQ9NYZ1 205 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 DLGAP2Q9P1A6 1054 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 SRPK3Q9UPE1 567 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 ECI2O75521 394 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 SCRG1O75711 98 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 SEMA3DO95025 777 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 CLPTM1O96005 669 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 PLATP00750 562 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 ICAM2P13598 275 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 PRKCIP41743 596 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 SUOXP51687 545 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 SPEM2Q0P670 501 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 PDE7AQ13946 482 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 CDK10Q15131 360 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 ARCQ7LC44 396 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 ZCCHC7Q8N3Z6 543 aaKnown RBP8.28□□□□□ -1.08
CD47-204ENST00000471694 NDNFQ8TB73 568 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 SCAMP4Q969E2 229 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 CASD1Q96PB1 797 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 DPH7Q9BTV6 452 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 HIPK2Q9H2X6 1198 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 NANOGQ9H9S0 305 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 XPNPEP1Q9NQW7 623 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 TMLHEQ9NVH6 421 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 PCDHB14Q9Y5E9 798 aa8.28□□□□□ -1.08
CD47-204ENST00000471694 E7ENX8 843 aa8.27□□□□□ -1.08
CD47-204ENST00000471694 ITGB1P05556 798 aa8.27□□□□□ -1.08
CD47-204ENST00000471694 H2BFMP0C1H6 154 aa8.27□□□□□ -1.08
CD47-204ENST00000471694 DCKP27707 260 aa8.27□□□□□ -1.08
CD47-204ENST00000471694 TAP2Q03519 686 aa8.27□□□□□ -1.08
CD47-204ENST00000471694 TRIM73Q86UV7 250 aa8.27□□□□□ -1.08
CD47-204ENST00000471694 APCDD1Q8J025 514 aa8.27□□□□□ -1.08
CD47-204ENST00000471694 FCRL5Q96RD9 977 aa8.27□□□□□ -1.08
CD47-204ENST00000471694 DOHHQ9BU89 302 aa8.27□□□□□ -1.08
CD47-204ENST00000471694 PCDH10Q9P2E7 1040 aa8.27□□□□□ -1.08
CD47-204ENST00000471694 ZNF639Q9UID6 485 aa8.27□□□□□ -1.08
CD47-204ENST00000471694 DHRS12A0PJE2 317 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 RCCD1A6NED2 376 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 PRRG2O14669 202 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 PIP5K1BO14986 540 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 PEPDP12955 493 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 ACPPP15309 386 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 DDCP20711 480 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 RPL26P61254 145 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 PRKCDQ05655 676 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 FASTKD3Q14CZ7 662 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 C9orf152Q5JTZ5 239 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 LAPTM4BQ86VI4 370 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 TMEM178AQ8NBL3 297 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 LPGAT1Q92604 370 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 NTAN1Q96AB6 310 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 CDKN2AIPNLQ96HQ2 116 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 THOC3Q96J01 351 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 OR5B2Q96R09 309 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 PCDHB18PQ96TA0 734 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 SMOQ99835 787 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 CTRCQ99895 268 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 FLRT1Q9NZU1 646 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 ING4Q9UNL4 249 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 RPL26L1Q9UNX3 145 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 MRPS2Q9Y399 296 aaKnown RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 ANKRD28O15084 1053 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 CAPN5O15484 640 aaPredicted RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 FOXD2O60548 495 aaPredicted RBP8.27□□□□□ -1.09
CD47-204ENST00000471694 PRAMEF11O60813 436 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 F10P00742 488 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 GLDCP23378 1020 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 IGFBP5P24593 272 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 SHC2P98077 582 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 NKPD1Q17RQ9 610 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 SLC39A11Q8N1S5 342 aa8.27□□□□□ -1.09
CD47-204ENST00000471694 SMG8Q8ND04 991 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms